RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SIGLEC7Q9Y286 467 aa18.02■□□□□ 0.48
HDAC1-201ENST00000373548 CORINQ9Y5Q5 1042 aa18.02■□□□□ 0.48
HDAC1-201ENST00000373548 IRGMA1A4Y4 181 aa18.02■□□□□ 0.47
HDAC1-201ENST00000373548 EFCAB7A8K855 629 aa18.02■□□□□ 0.47
HDAC1-201ENST00000373548 BHLHE40O14503 412 aa18.02■□□□□ 0.47
HDAC1-201ENST00000373548 MYL12BO14950 172 aa18.02■□□□□ 0.47
HDAC1-201ENST00000373548 SAGP10523 405 aaPredicted RBP18.02■□□□□ 0.47
HDAC1-201ENST00000373548 SOX3P41225 446 aa18.02■□□□□ 0.47
HDAC1-201ENST00000373548 RBM34P42696 430 aaKnown RBP18.02■□□□□ 0.47
HDAC1-201ENST00000373548 SERPINB10P48595 397 aa18.02■□□□□ 0.47
HDAC1-201ENST00000373548 SQSTM1Q13501 440 aa18.02■□□□□ 0.47
HDAC1-201ENST00000373548 ANKDD1AQ495B1 522 aa18.02■□□□□ 0.47
HDAC1-201ENST00000373548 THSD4Q6ZMP0 1018 aa18.02■□□□□ 0.47
HDAC1-201ENST00000373548 USP43Q70EL4 1123 aa18.02■□□□□ 0.47
HDAC1-201ENST00000373548 LAPTM4BQ86VI4 370 aa18.02■□□□□ 0.47
HDAC1-201ENST00000373548 BBS1Q8NFJ9 593 aa18.02■□□□□ 0.47
HDAC1-201ENST00000373548 SH3YL1Q96HL8 342 aaPredicted RBP18.02■□□□□ 0.47
HDAC1-201ENST00000373548 RACGAP1Q9H0H5 632 aa18.02■□□□□ 0.47
HDAC1-201ENST00000373548 HINT3Q9NQE9 182 aaKnown RBP18.02■□□□□ 0.47
HDAC1-201ENST00000373548 A0A1W2PQM1 296 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 RCBTB2O95199 551 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 IL33O95760 270 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 TUBA1BP68363 451 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 NSDHLQ15738 373 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 RPL13AP3Q6NVV1 102 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 ULK3Q6PHR2 472 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 TUBA1AQ71U36 451 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 RFKQ969G6 155 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 ADIPOR1Q96A54 375 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 NUDT9Q9BW91 350 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 VN1R1Q9GZP7 353 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.01■□□□□ 0.47
HDAC1-201ENST00000373548 FRG2CA6NGY1 282 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 LAMTOR5O43504 91 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 BMP7P18075 431 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 CCL7P80098 99 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 TMEM44Q2T9K0 475 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 FNDC7Q5VTL7 733 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 NXNL2Q5VZ03 156 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 LINC00299Q6ZSB3 139 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 SHFQ7M4L6 423 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 MAML2Q8IZL2 1156 aaPredicted RBP18.01■□□□□ 0.47
HDAC1-201ENST00000373548 LNX2Q8N448 690 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 LCORQ96JN0 433 aaPredicted RBP18.01■□□□□ 0.47
HDAC1-201ENST00000373548 MKKSQ9NPJ1 570 aaPredicted RBP18.01■□□□□ 0.47
HDAC1-201ENST00000373548 RPS6KB2Q9UBS0 482 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 CTSFQ9UBX1 484 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 CFL2Q9Y281 166 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 SLC35A3Q9Y2D2 325 aa18.01■□□□□ 0.47
HDAC1-201ENST00000373548 TRAV27A0A087WT01 109 aa18■□□□□ 0.47
HDAC1-201ENST00000373548 SYNDIG1LA6NDD5 238 aa18■□□□□ 0.47
HDAC1-201ENST00000373548 J3QRK9 145 aa18■□□□□ 0.47
HDAC1-201ENST00000373548 PTP4A3O75365 173 aa18■□□□□ 0.47
HDAC1-201ENST00000373548 MYL12AP19105 171 aa18■□□□□ 0.47
HDAC1-201ENST00000373548 RPS3AP61247 264 aaKnown RBP18■□□□□ 0.47
HDAC1-201ENST00000373548 CSTF1Q05048 431 aaKnown RBP18■□□□□ 0.47
HDAC1-201ENST00000373548 C1DQ13901 141 aaKnown RBP18■□□□□ 0.47
HDAC1-201ENST00000373548 SMARCD3Q6STE5 483 aa18■□□□□ 0.47
HDAC1-201ENST00000373548 COX15Q7KZN9 410 aa18■□□□□ 0.47
HDAC1-201ENST00000373548 CPOQ8IVL8 374 aa18■□□□□ 0.47
HDAC1-201ENST00000373548 GATSQ8NAP1 163 aa18■□□□□ 0.47
HDAC1-201ENST00000373548 FAM71CQ8NEG0 241 aa18■□□□□ 0.47
HDAC1-201ENST00000373548 EDAQ92838 391 aa18■□□□□ 0.47
HDAC1-201ENST00000373548 UBQLN4Q9NRR5 601 aa18■□□□□ 0.47
HDAC1-201ENST00000373548 SLC22A11Q9NSA0 550 aa18■□□□□ 0.47
HDAC1-201ENST00000373548 MKL2Q9ULH7 1088 aa18■□□□□ 0.47
HDAC1-201ENST00000373548 ASCC3Q8N3C0 2202 aaKnown RBP18■□□□□ 0.47
HDAC1-201ENST00000373548 FAM183AA6NL82 134 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 ANKRD34CP0C6C1 535 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 ENDOUP21128 410 aaKnown RBP17.99■□□□□ 0.47
HDAC1-201ENST00000373548 MLLT11Q13015 90 aaPredicted RBP17.99■□□□□ 0.47
HDAC1-201ENST00000373548 CD226Q15762 336 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 TIMM50Q3ZCQ8 353 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 CXXC5Q7LFL8 322 aaKnown RBP17.99■□□□□ 0.47
HDAC1-201ENST00000373548 KBTBD8Q8NFY9 601 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 OR6Q1Q8NGQ2 317 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 OR51A7Q8NH64 312 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 HOXD1Q9GZZ0 328 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 AKIP1Q9NQ31 210 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 SRPK3Q9UPE1 567 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 AGRPO00253 132 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 SOCS6O14544 535 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 GNB5O14775 395 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 HCN1O60741 890 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 GPX5O75715 221 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 CFIP05156 583 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 HTR1FP30939 366 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 SLC35F1Q5T1Q4 408 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 RHBDD2Q6NTF9 364 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 C9orf40Q8IXQ3 194 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 OR14A16Q8NHC5 309 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 GAL3ST4Q96RP7 486 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 GAREM1Q9H706 876 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 FBXO8Q9NRD0 319 aa17.99■□□□□ 0.47
HDAC1-201ENST00000373548 C2orf92A0A1B0GVN3 265 aa17.98■□□□□ 0.47
HDAC1-201ENST00000373548 CLDN25C9JDP6 229 aa17.98■□□□□ 0.47
HDAC1-201ENST00000373548 OIP5O43482 229 aa17.98■□□□□ 0.47
HDAC1-201ENST00000373548 UTS2O95399 124 aa17.98■□□□□ 0.47
HDAC1-201ENST00000373548 IDUAP35475 653 aa17.98■□□□□ 0.47
HDAC1-201ENST00000373548 ADH7P40394 386 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms