RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 GNB3P16520 340 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 DAPP51397 102 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 ZNF425Q6IV72 752 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 CMTM1Q8IZ96 169 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 C22orf15Q8WYQ4 148 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 C1QTNF2Q9BXJ5 285 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 QRSL1Q9H0R6 528 aaKnown RBP13.34□□□□□ -0.27
LMX1B-202ENST00000373474 USP22Q9UPT9 525 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 FBXO7Q9Y3I1 522 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 K7EPK0 472 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 IL33O95760 270 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 C1SP09871 688 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 VIPR2P41587 438 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 FAM71E2Q8N5Q1 922 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 NAA11Q9BSU3 229 aaPredicted RBP13.34□□□□□ -0.27
LMX1B-202ENST00000373474 INPP5EQ9NRR6 644 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 UFSP2Q9NUQ7 469 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 A0A0U1RQK1 487 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 P2RX6O15547 441 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 ACP2P11117 423 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 ARSAP15289 507 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 NTSR1P30989 418 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 MMP12P39900 470 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 C1orf61Q13536 156 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 AWAT2Q6E213 333 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 BRIX1Q8TDN6 353 aaKnown RBP13.34□□□□□ -0.27
LMX1B-202ENST00000373474 FOXJ1Q92949 421 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 FCRL1Q96LA6 429 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 MICU1Q9BPX6 476 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 KLHL13Q9P2N7 655 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 REV1Q9UBZ9 1251 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 J3KTA2 159 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 PEX12O00623 359 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 IL1AP01583 271 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 PNMTP11086 282 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 SSTR4P31391 388 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 CDS1Q92903 461 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 EVA1AQ9H8M9 152 aa13.34□□□□□ -0.27
LMX1B-202ENST00000373474 APOBEC3BQ9UH17 382 aaKnown RBP13.34□□□□□ -0.27
LMX1B-202ENST00000373474 VSTM2BA6NLU5 285 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 ZNF736B4DX44 427 aaPredicted RBP13.33□□□□□ -0.28
LMX1B-202ENST00000373474 CASP3P42574 277 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 SPOCK1Q08629 439 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 RSU1Q15404 277 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 ESCO2Q56NI9 601 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 OR4Q3Q8NH05 313 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 SMIM14Q96QK8 99 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 ZNF587Q96SQ5 575 aaPredicted RBP13.33□□□□□ -0.28
LMX1B-202ENST00000373474 LINC00597Q9H2U6 94 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 DDX31Q9H8H2 851 aaKnown RBP13.33□□□□□ -0.28
LMX1B-202ENST00000373474 CREBZFQ9NS37 354 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 C2orf42Q9NWW7 574 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 ZNF443Q9Y2A4 671 aaPredicted RBP13.33□□□□□ -0.28
LMX1B-202ENST00000373474 AGAP14A8MT82 685 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 AP1G1O43747 822 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 C21orf33P30042 268 aaPredicted RBP13.33□□□□□ -0.28
LMX1B-202ENST00000373474 RABIFP47224 123 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 TAS2R30P59541 319 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 UBE2KP61086 200 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 ZNF705AQ6ZN79 300 aaPredicted RBP13.33□□□□□ -0.28
LMX1B-202ENST00000373474 TAS1R1Q7RTX1 841 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 RHOXF1Q8NHV9 184 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 ZNF417Q8TAU3 575 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 ST7LQ8TDW4 575 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 ZMYND19Q96E35 227 aaPredicted RBP13.33□□□□□ -0.28
LMX1B-202ENST00000373474 ZNF681Q96N22 645 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 B3GALNT1O75752 331 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 TNFSF8P32971 234 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 RNF4P78317 190 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 HTRA4P83105 476 aaPredicted RBP13.33□□□□□ -0.28
LMX1B-202ENST00000373474 OR1S1Q8NH92 325 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 FOXE1O00358 373 aaPredicted RBP13.33□□□□□ -0.28
LMX1B-202ENST00000373474 GPR39O43194 453 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 SYNGR4O95473 234 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 AGAP7PQ5VUJ5 663 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 CREB3L2Q70SY1 520 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 ACOT4Q8N9L9 421 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 OR8J2Q8NGG1 315 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 GPR174Q9BXC1 333 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 IL37Q9NZH6 218 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 GMEB2Q9UKD1 530 aa13.33□□□□□ -0.28
LMX1B-202ENST00000373474 AK6Q9Y3D8 172 aaKnown RBP13.33□□□□□ -0.28
LMX1B-202ENST00000373474 ANTXRLA6NF34 631 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 TP53P04637 393 aaPredicted RBP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 HMGN2P05204 90 aaKnown RBP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 SGSHP51688 502 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 CTSCP53634 463 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 HHEXQ03014 270 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 RTL6Q6ICC9 239 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 METAP1DQ6UB28 335 aaPredicted RBP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 LIPIQ6XZB0 460 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 MEPCEQ7L2J0 689 aaKnown RBP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 PTRH1Q86Y79 214 aaKnown RBP13.32□□□□□ -0.28
LMX1B-202ENST00000373474 HORMAD2Q8N7B1 307 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 OR13F1Q8NGS4 319 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 OR7D2Q96RA2 312 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 LDAHQ9H6V9 325 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 SERTAD4Q9NUC0 356 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 PCDHGA5Q9Y5G8 931 aa13.32□□□□□ -0.28
LMX1B-202ENST00000373474 GPR137BO60478 399 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms