RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 LMAN1LQ9HAT1 526 aa17.29■□□□□ 0.36
USP49-202ENST00000373010 FBXL21Q9UKT6 434 aa17.29■□□□□ 0.36
USP49-202ENST00000373010 PCDH15Q96QU1 1955 aa17.29■□□□□ 0.36
USP49-202ENST00000373010 CD8B2A6NJW9 211 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 SNPHO15079 494 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 SRPX2O60687 465 aaPredicted RBP17.28■□□□□ 0.36
USP49-202ENST00000373010 PTP4A3O75365 173 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 CD8BP10966 210 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 NOS3P29474 1203 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 GFERP55789 205 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 CADM2Q8N3J6 435 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 TCTN2Q96GX1 697 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 TNFRSF13CQ96RJ3 184 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 JAM3Q9BX67 310 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 OR51V1Q9H2C8 321 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 CMC2Q9NRP2 79 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 WDR70Q9NW82 654 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 SHISA3A0PJX4 238 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 FAM86C2PA6NEL3 165 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 GABRPO00591 440 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 DVL2O14641 736 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 CASKO14936 926 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 NCR1O76036 304 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 PPP1R3DO95685 299 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 CSF2P04141 144 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 CLUP10909 449 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 SLC16A1P53985 500 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 RPS7P62081 194 aaKnown RBP17.28■□□□□ 0.36
USP49-202ENST00000373010 ACSM1Q08AH1 577 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 ELOCQ15369 112 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 FAM131AQ6UXB0 335 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 ACBD7Q8N6N7 88 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 CYB561A3Q8NBI2 242 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 MMABQ96EY8 250 aaPredicted RBP17.28■□□□□ 0.36
USP49-202ENST00000373010 DGAT2Q96PD7 388 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 SLC38A3Q99624 504 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 TIMP4Q99727 224 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 LRIT1Q9P2V4 623 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 ERVK-19Q9WJR5 959 aa17.28■□□□□ 0.36
USP49-202ENST00000373010 MRPS33Q9Y291 106 aaKnown RBP17.28■□□□□ 0.36
USP49-202ENST00000373010 TMEM184BQ9Y519 407 aaPredicted RBP17.28■□□□□ 0.36
USP49-202ENST00000373010 SIRT4Q9Y6E7 314 aaPredicted RBP17.28■□□□□ 0.36
USP49-202ENST00000373010 MN1Q10571 1320 aaPredicted RBP17.27■□□□□ 0.36
USP49-202ENST00000373010 C2orf92A0A1B0GVN3 265 aa17.27■□□□□ 0.36
USP49-202ENST00000373010 LINC00854A0A1B0GVQ3 168 aa17.27■□□□□ 0.36
USP49-202ENST00000373010 PRR23D1E9PI22 279 aaPredicted RBP17.27■□□□□ 0.36
USP49-202ENST00000373010 PRKNO60260 465 aaPredicted RBP17.27■□□□□ 0.36
USP49-202ENST00000373010 APOA1P02647 267 aa17.27■□□□□ 0.36
USP49-202ENST00000373010 MRPL3P09001 348 aaKnown RBP17.27■□□□□ 0.36
USP49-202ENST00000373010 PRR23D2P0DMB1 279 aaPredicted RBP17.27■□□□□ 0.36
USP49-202ENST00000373010 IL9P15248 144 aa17.27■□□□□ 0.36
USP49-202ENST00000373010 COPZ1P61923 177 aa17.27■□□□□ 0.36
USP49-202ENST00000373010 IGLV3-21P80748 117 aaPredicted RBP17.27■□□□□ 0.36
USP49-202ENST00000373010 KRR1Q13601 381 aaKnown RBP17.27■□□□□ 0.36
USP49-202ENST00000373010 ALG10BQ5I7T1 473 aa17.27■□□□□ 0.36
USP49-202ENST00000373010 ZNF362Q5T0B9 420 aaPredicted RBP17.27■□□□□ 0.36
USP49-202ENST00000373010 RPL13AP3Q6NVV1 102 aa17.27■□□□□ 0.36
USP49-202ENST00000373010 GRAMD2AQ8IUY3 354 aa17.27■□□□□ 0.36
USP49-202ENST00000373010 ZNF595Q8IYB9 648 aa17.27■□□□□ 0.36
USP49-202ENST00000373010 NLGN4YQ8NFZ3 816 aaPredicted RBP17.27■□□□□ 0.36
USP49-202ENST00000373010 SMAP2Q8WU79 429 aaPredicted RBP17.27■□□□□ 0.36
USP49-202ENST00000373010 DIRAS2Q96HU8 199 aa17.27■□□□□ 0.36
USP49-202ENST00000373010 TGM7Q96PF1 710 aa17.27■□□□□ 0.36
USP49-202ENST00000373010 ALG8Q9BVK2 526 aa17.27■□□□□ 0.36
USP49-202ENST00000373010 FBXL4Q9UKA2 621 aa17.27■□□□□ 0.36
USP49-202ENST00000373010 CA14Q9ULX7 337 aa17.27■□□□□ 0.36
USP49-202ENST00000373010 CCDC182A6NF36 153 aa17.27■□□□□ 0.35
USP49-202ENST00000373010 HYAL3O43820 417 aaPredicted RBP17.27■□□□□ 0.35
USP49-202ENST00000373010 HCN1O60741 890 aa17.27■□□□□ 0.35
USP49-202ENST00000373010 NUDT1P36639 197 aa17.27■□□□□ 0.35
USP49-202ENST00000373010 FASLGP48023 281 aa17.27■□□□□ 0.35
USP49-202ENST00000373010 TPTEP56180 551 aa17.27■□□□□ 0.35
USP49-202ENST00000373010 GLYR1Q49A26 553 aaPredicted RBP17.27■□□□□ 0.35
USP49-202ENST00000373010 OAFQ86UD1 273 aa17.27■□□□□ 0.35
USP49-202ENST00000373010 OR10H4Q8NGA5 316 aa17.27■□□□□ 0.35
USP49-202ENST00000373010 MSANTD3Q96H12 275 aa17.27■□□□□ 0.35
USP49-202ENST00000373010 TRIM2Q9C040 744 aa17.27■□□□□ 0.35
USP49-202ENST00000373010 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.27■□□□□ 0.35
USP49-202ENST00000373010 MBTPS2O43462 519 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 NSA2O95478 260 aaKnown RBP17.26■□□□□ 0.35
USP49-202ENST00000373010 HLA-DPB1P04440 258 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 SRFP11831 508 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 MLLT3P42568 568 aaPredicted RBP17.26■□□□□ 0.35
USP49-202ENST00000373010 GPR3P46089 330 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 GABRA4P48169 554 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 CRYZQ08257 329 aaKnown RBP17.26■□□□□ 0.35
USP49-202ENST00000373010 SELENBP1Q13228 472 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 FHL1Q13642 323 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 CRMP1Q14194 572 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 KIRREL2Q6UWL6 708 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 C16orf52Q8NHV5 167 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 TEAD3Q99594 435 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 ZNF426Q9BUY5 554 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 MARCH7Q9H992 704 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 MCCC2Q9HCC0 563 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 SOHLH2Q9NX45 425 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 IGHV5-51A0A0C4DH38 117 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 DAPL1A0PJW8 107 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 NPIPB9F8W1W9 429 aa17.26■□□□□ 0.35
USP49-202ENST00000373010 CLDN4O14493 209 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms