RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 OR2A12Q8NGT7 310 aa8.01□□□□□ -1.13
ABCA4-201ENST00000370225 C22orf15Q8WYQ4 148 aa8.01□□□□□ -1.13
ABCA4-201ENST00000370225 EBF1Q9UH73 591 aa8.01□□□□□ -1.13
ABCA4-201ENST00000370225 ADAMTS5Q9UNA0 930 aa8.01□□□□□ -1.13
ABCA4-201ENST00000370225 SCN11AQ9UI33 1791 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 MDFIC2A0A1B0GVS7 189 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 SOBPA7XYQ1 873 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 HPRP00739 348 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 IGHV3-9P01782 118 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 OR8U9P0C7N5 309 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 HIST1H1TP22492 207 aaPredicted RBP8□□□□□ -1.13
ABCA4-201ENST00000370225 SSTR4P31391 388 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 AHRP35869 848 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 ZNF136P52737 540 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 ESCO2Q56NI9 601 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 KHDC1LQ5JSQ8 128 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 GPR155Q7Z3F1 870 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 MRPL38Q96DV4 380 aaKnown RBP8□□□□□ -1.13
ABCA4-201ENST00000370225 MAELQ96JY0 434 aaKnown RBP8□□□□□ -1.13
ABCA4-201ENST00000370225 C4orf36Q96KX1 117 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 SULT4A1Q9BR01 284 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 CDCP1Q9H5V8 836 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 OR6C2Q9NZP2 312 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 PRICKLE3O43900 615 aaPredicted RBP8□□□□□ -1.13
ABCA4-201ENST00000370225 ATG12O94817 140 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 PRLP01236 227 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 IGHG1P01857 330 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 ARSBP15848 533 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 CHMP24386 653 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 SF3A2Q15428 464 aaKnown RBP8□□□□□ -1.13
ABCA4-201ENST00000370225 EXOSC6Q5RKV6 272 aaKnown RBP8□□□□□ -1.13
ABCA4-201ENST00000370225 ESX1Q8N693 406 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 SYNPRQ8TBG9 265 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 SAT2Q96F10 170 aaPredicted RBP8□□□□□ -1.13
ABCA4-201ENST00000370225 PHOX2BQ99453 314 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 VN1R3Q9BXE9 311 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 PBX4Q9BYU1 374 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 SMOXQ9NWM0 555 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 TPOP07202 933 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 HTR3AP46098 478 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 MAP2K3P46734 347 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 KIAA0907Q7Z7F0 614 aaPredicted RBP8□□□□□ -1.13
ABCA4-201ENST00000370225 BATF2Q8N1L9 274 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 KLHDC9Q8NEP7 349 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 VN1R2Q8NFZ6 395 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 TIMM29Q9BSF4 260 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 GFRA2O00451 464 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 DVL2O14641 736 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 STK17BO94768 372 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 CNN3Q15417 329 aaKnown RBP8□□□□□ -1.13
ABCA4-201ENST00000370225 SYPL1Q16563 259 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 C9orf152Q5JTZ5 239 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 FRMD1Q8N878 549 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 ASCC1Q8N9N2 400 aaKnown RBP8□□□□□ -1.13
ABCA4-201ENST00000370225 IFI44Q8TCB0 444 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 LGALS12Q96DT0 336 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 WDR83Q9BRX9 315 aaKnown RBP8□□□□□ -1.13
ABCA4-201ENST00000370225 C1QTNF6Q9BXI9 259 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 ARL6Q9H0F7 186 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 ABCG5Q9H222 651 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 DDX31Q9H8H2 851 aaKnown RBP8□□□□□ -1.13
ABCA4-201ENST00000370225 OLAHQ9NV23 265 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 SAGE1Q9NXZ1 904 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 FAM166BA8MTA8 275 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 TRAPPC2LH3BP13 241 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 ETV4P43268 484 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 WBP2NLQ6ICG8 309 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 OPN5Q6U736 354 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 GAREM2Q75VX8 874 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 RELL1Q8IUW5 271 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 CBARPQ8N350 705 aaPredicted RBP8□□□□□ -1.13
ABCA4-201ENST00000370225 OR56B2PQ8NGI1 322 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 TOX2Q96NM4 488 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 TMEM246Q9BRR3 403 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 MED20Q9H944 212 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 TEX10Q9NXF1 929 aaPredicted RBP8□□□□□ -1.13
ABCA4-201ENST00000370225 MAB21L2Q9Y586 359 aa8□□□□□ -1.13
ABCA4-201ENST00000370225 VIRMAQ69YN4 1812 aaKnown RBP8□□□□□ -1.13
ABCA4-201ENST00000370225 CASC3O15234 703 aaKnown RBP7.99□□□□□ -1.13
ABCA4-201ENST00000370225 SLC43A1O75387 559 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 SERPINE2P07093 398 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 RRADP55042 308 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 OR52W1Q6IF63 320 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 OR7E24Q6IFN5 339 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 TSSK4Q6SA08 328 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 ZADH2Q8N4Q0 377 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 MARVELD2Q8N4S9 558 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 SIRT6Q8N6T7 355 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 CCDC71LQ8N9Z2 235 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 THOC3Q96J01 351 aaKnown RBP7.99□□□□□ -1.13
ABCA4-201ENST00000370225 SYT3Q9BQG1 590 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 DPCDQ9BVM2 203 aaPredicted RBP7.99□□□□□ -1.13
ABCA4-201ENST00000370225 ARNT2Q9HBZ2 717 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 UBQLN4Q9NRR5 601 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 SLC6A14Q9UN76 642 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 ZNF337Q9Y3M9 751 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 H0Y8X5 98 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 ZNF749O43361 778 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 TUSC2O75896 110 aa7.99□□□□□ -1.13
ABCA4-201ENST00000370225 DDAH2O95865 285 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms