RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 A0A0G2JMM0 328 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 A0A1W2PPB8 328 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 A0A1W2PRS3 328 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 KIR3DP1A8MWS1 328 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 FMO6PO60774 539 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 IFNA8P32881 189 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 TRIP10Q15642 601 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 TOMM34Q15785 309 aaPredicted RBP9.97□□□□□ -0.81
BRCC3-204ENST00000369462 LRRC36Q1X8D7 754 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 ZNF605Q86T29 641 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 WDSUB1Q8N9V3 476 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 CATSPER1Q8NEC5 780 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 TOR1AIP2Q8NFQ8 470 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 ZNF563Q8TA94 476 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 ZNF524Q96C55 264 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 FRMD6Q96NE9 622 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 GNRHR2Q96P88 292 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 TRIM2Q9C040 744 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 DSN1Q9H410 356 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 DEPPQ9NTK1 212 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 ACER3Q9NUN7 267 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 CSAG2Q9Y5P2 127 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 A0A1B0GWA3 101 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 SAC3D1A6NKF1 404 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 CDC40O60508 579 aaKnown RBP eCLIP9.97□□□□□ -0.81
BRCC3-204ENST00000369462 SNX4O95219 450 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 GADD45GO95257 159 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 H1F0P07305 194 aaKnown RBP9.97□□□□□ -0.81
BRCC3-204ENST00000369462 UQCRBP14927 111 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 ZNF23P17027 643 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 SLC6A8P48029 635 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 CBFBQ13951 182 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 LAPTM4AQ15012 233 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 FGD3Q5JSP0 725 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 IGFL2Q6UWQ7 119 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 LSMEM1Q8N8F7 131 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 EXTL1Q92935 676 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 SMAD5Q99717 465 aaKnown RBP9.97□□□□□ -0.81
BRCC3-204ENST00000369462 CIB1Q99828 191 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 FBXL2Q9UKC9 423 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 ZMIZ1Q9ULJ6 1067 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 OAZ3Q9UMX2 235 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 LYVE1Q9Y5Y7 322 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 TRAPPC13A5PLN9 417 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 TNFRSF11BO00300 401 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 CDK2AP1O14519 115 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 THY1P04216 161 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 PGCP20142 388 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 MSX1P28360 303 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 ST3GAL3Q11203 375 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 COLEC12Q5KU26 742 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 LPCAT4Q643R3 524 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 TIGD3Q6B0B8 471 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 TMEM179BQ7Z7N9 219 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 PLCZ1Q86YW0 608 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 OFCC1Q8IZS5 231 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 MDS2Q8NDY4 140 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 OR4K17Q8NGC6 315 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 OR1J4Q8NGS1 313 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 GPR119Q8TDV5 335 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 SLC41A3Q96GZ6 507 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 RPS6KB2Q9UBS0 482 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 SLC7A7Q9UM01 511 aa9.97□□□□□ -0.81
BRCC3-204ENST00000369462 MAGED1Q9Y5V3 778 aaPredicted RBP9.97□□□□□ -0.81
BRCC3-204ENST00000369462 IGLV3-32A0A0A0MS00 114 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 DPM1O60762 260 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 OR5F1O95221 314 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 SP1P08047 785 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 CD46P15529 392 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 CNR1P21554 472 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 TNFSF10P50591 281 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 TBR1Q16650 682 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 ALG10BQ5I7T1 473 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 SLC25A25Q6KCM7 469 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 ZNF613Q6PF04 617 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 ARSKQ6UWY0 536 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 GDF7Q7Z4P5 450 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 GALNTL5Q7Z4T8 443 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 HS3ST5Q8IZT8 346 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 PIK3C3Q8NEB9 887 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 SLC7A13Q8TCU3 470 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 SLC39A7Q92504 469 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 EME1Q96AY2 570 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 NTNG2Q96CW9 530 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 MAN2C1Q9NTJ4 1040 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 STOML1Q9UBI4 398 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 VDAC3Q9Y277 283 aa9.96□□□□□ -0.81
BRCC3-204ENST00000369462 PCDHGA9Q9Y5G4 932 aaKnown RBP9.96□□□□□ -0.81
BRCC3-204ENST00000369462 A0A0B4J2E0 115 aa9.96□□□□□ -0.82
BRCC3-204ENST00000369462 TRBV4-1A0A0J9YWV2 114 aa9.96□□□□□ -0.82
BRCC3-204ENST00000369462 A0A1B0GX12 115 aa9.96□□□□□ -0.82
BRCC3-204ENST00000369462 A0A1W2PRQ8 180 aa9.96□□□□□ -0.82
BRCC3-204ENST00000369462 ANKUB1A6NFN9 424 aa9.96□□□□□ -0.82
BRCC3-204ENST00000369462 MKRN2OSH3BPM6 223 aa9.96□□□□□ -0.82
BRCC3-204ENST00000369462 PDLIM1O00151 329 aa9.96□□□□□ -0.82
BRCC3-204ENST00000369462 SNPHO15079 494 aa9.96□□□□□ -0.82
BRCC3-204ENST00000369462 TRIM3O75382 744 aaPredicted RBP9.96□□□□□ -0.82
BRCC3-204ENST00000369462 NTN1O95631 604 aa9.96□□□□□ -0.82
BRCC3-204ENST00000369462 PTNP21246 168 aa9.96□□□□□ -0.82
BRCC3-204ENST00000369462 MST1P26927 711 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms