RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 OR4D11Q8NGI4 311 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 C9orf43Q8TAL5 461 aaPredicted RBP9.88□□□□□ -0.83
TPM3-212ENST00000368533 RELTQ969Z4 430 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 FRMD6Q96NE9 622 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 MS4A7Q9GZW8 240 aaPredicted RBP9.88□□□□□ -0.83
TPM3-212ENST00000368533 ZNF304Q9HCX3 659 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 NTNG1Q9Y2I2 539 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 SPTBN2O15020 2390 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 CENPVL1A0A0U1RR11 272 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 ZAR1LA6NP61 321 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 MYL12BO14950 172 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 FOXS1O43638 330 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 IFNA16P05015 189 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 ADRA2AP08913 450 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 SMIM10L1P0DMW3 83 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 OSMP13725 252 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 CLDN6P56747 220 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 ELOAQ14241 798 aaKnown RBP9.88□□□□□ -0.83
TPM3-212ENST00000368533 TATDN3Q17R31 274 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 CLVS2Q5SYC1 327 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 CFAP77Q6ZQR2 320 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 VRK2Q86Y07 508 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 KRT73Q86Y46 540 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 OR9Q1Q8NGQ5 310 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 EDAQ92838 391 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 SMIM10Q96HG1 83 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 OR7D2Q96RA2 312 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 ASPNQ9BXN1 380 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 ABCB9Q9NP78 766 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 MCUBQ9NWR8 336 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 LYARQ9NX58 379 aaKnown RBP9.88□□□□□ -0.83
TPM3-212ENST00000368533 MALT1Q9UDY8 824 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 SLC13A4Q9UKG4 626 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 SSUH2Q9Y2M2 353 aa9.88□□□□□ -0.83
TPM3-212ENST00000368533 CNOT1A5YKK6 2376 aaKnown RBP9.88□□□□□ -0.83
TPM3-212ENST00000368533 CPMP14384 443 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 ELAVL4P26378 380 aaKnown RBP9.87□□□□□ -0.83
TPM3-212ENST00000368533 CSTF2P33240 577 aaKnown RBP eCLIP9.87□□□□□ -0.83
TPM3-212ENST00000368533 RUNX1T1Q06455 604 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 GALEQ14376 348 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 GPR68Q15743 365 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 LIPKQ5VXJ0 399 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 SLC30A8Q8IWU4 369 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 OR6C4Q8NGE1 309 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 ZFPM2Q8WW38 1151 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 AKAP1Q92667 903 aaKnown RBP eCLIP9.87□□□□□ -0.838e-7■■■■□ 24.6
TPM3-212ENST00000368533 TSSK6Q9BXA6 273 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 KCNN2Q9H2S1 579 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 ACSS1Q9NUB1 689 aaPredicted RBP9.87□□□□□ -0.83
TPM3-212ENST00000368533 FTSJ1Q9UET6 329 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 PILRBQ9UKJ0 227 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 CFL2Q9Y281 166 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 AHCTF1Q8WYP5 2266 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 SH3D21A4FU49 640 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 CYR61O00622 381 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 ADAP00813 363 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 PSMA1P25786 263 aaKnown RBP9.87□□□□□ -0.83
TPM3-212ENST00000368533 FRKP42685 505 aaPredicted RBP9.87□□□□□ -0.83
TPM3-212ENST00000368533 HMGA2P52926 109 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 PDX1P52945 283 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 TRA2BP62995 288 aaKnown RBP9.87□□□□□ -0.83
TPM3-212ENST00000368533 STX4Q12846 297 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 SPHARQ15513 63 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 VWA2Q5GFL6 755 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 PAQR6Q6TCH4 344 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 RRM2BQ7LG56 351 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 LHFPL5Q8TAF8 219 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 SLC7A13Q8TCU3 470 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 ADAMTS15Q8TE58 950 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 ASB15Q8WXK1 588 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 OTULINQ96BN8 352 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 NXF2Q9GZY0 626 aaKnown RBP9.87□□□□□ -0.83
TPM3-212ENST00000368533 MGAT4BQ9UQ53 548 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 FAM221BA6H8Z2 402 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 TLCD2A6NGC4 264 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 TEX46H3BTG2 121 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 GMFGO60234 142 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 GPX5O75715 221 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 ZNF10P21506 573 aaPredicted RBP9.87□□□□□ -0.83
TPM3-212ENST00000368533 CD1CP29017 333 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 SOX18P35713 384 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 AVPR1BP47901 424 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 C1DQ13901 141 aaKnown RBP9.87□□□□□ -0.83
TPM3-212ENST00000368533 SNAPC1Q16533 368 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 FAM131AQ6UXB0 335 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 OR4N2Q8NGD1 307 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 SLC35A4Q96G79 324 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 BARHL1Q9BZE3 327 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 RNF121Q9H920 327 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 GALNT9Q9HCQ5 603 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 P2RX2Q9UBL9 471 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 PHF11Q9UIL8 331 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 SLC9A8Q9Y2E8 581 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 PCDHGB2Q9Y5G2 931 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 ALG5Q9Y673 324 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 R4GN57 208 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 V9GYH0 126 aa9.87□□□□□ -0.83
TPM3-212ENST00000368533 LOC400499M0QZD8 3231 aa9.86□□□□□ -0.83
TPM3-212ENST00000368533 TEX51A0A1B0GUA7 166 aa9.86□□□□□ -0.83
TPM3-212ENST00000368533 M0R296 226 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms