RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 RASSF5Q8WWW0 418 aa9.13□□□□□ -0.95
TPM3-210ENST00000368530 RIT1Q92963 219 aa9.13□□□□□ -0.95
TPM3-210ENST00000368530 ZG16BQ96DA0 208 aa9.13□□□□□ -0.95
TPM3-210ENST00000368530 C14orf79Q96F83 325 aa9.13□□□□□ -0.95
TPM3-210ENST00000368530 FRMD6Q96NE9 622 aa9.13□□□□□ -0.95
TPM3-210ENST00000368530 TRNT1Q96Q11 434 aaKnown RBP9.13□□□□□ -0.95
TPM3-210ENST00000368530 ENKD1Q9H0I2 346 aa9.13□□□□□ -0.95
TPM3-210ENST00000368530 CXorf21Q9HAI6 301 aa9.13□□□□□ -0.95
TPM3-210ENST00000368530 NECTIN3Q9NQS3 549 aa9.13□□□□□ -0.95
TPM3-210ENST00000368530 PLSCR2Q9NRY7 297 aa9.13□□□□□ -0.95
TPM3-210ENST00000368530 PNPLA3Q9NST1 481 aa9.13□□□□□ -0.95
TPM3-210ENST00000368530 FAM118AQ9NWS6 357 aa9.13□□□□□ -0.95
TPM3-210ENST00000368530 CALML5Q9NZT1 146 aa9.13□□□□□ -0.95
TPM3-210ENST00000368530 TEKT2Q9UIF3 430 aa9.13□□□□□ -0.95
TPM3-210ENST00000368530 NPIPA5A0A0B4J1W7 369 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 A8MUA0 341 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 NPIPA7E9PJI5 369 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 FRS3O43559 492 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 SMNDC1O75940 238 aaKnown RBP eCLIP9.12□□□□□ -0.95
TPM3-210ENST00000368530 GADD45GO95257 159 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 CLDN14O95500 239 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 EPPINO95925 133 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 AGR2O95994 175 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 PABPC4LP0CB38 370 aaKnown RBP9.12□□□□□ -0.95
TPM3-210ENST00000368530 SMIM18P0DKX4 95 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 NPIPA8P0DM63 369 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 ATP6V1B1P15313 513 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 RHCEP18577 417 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 GABRA3P34903 492 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 RAD23AP54725 363 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 IGLV3-21P80748 117 aaPredicted RBP9.12□□□□□ -0.95
TPM3-210ENST00000368530 RHAGQ02094 409 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 GPR68Q15743 365 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 FGD3Q5JSP0 725 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 DCST2Q5T1A1 773 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 ZNF468Q5VIY5 522 aaPredicted RBP9.12□□□□□ -0.95
TPM3-210ENST00000368530 PRAMEF8Q5VWM4 474 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 PRAMEF7Q5VXH5 474 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 TTC33Q6PID6 262 aaPredicted RBP9.12□□□□□ -0.95
TPM3-210ENST00000368530 FIGNL1Q6PIW4 674 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 SPNS3Q6ZMD2 512 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 FRRS1Q6ZNA5 592 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 DOLPP1Q86YN1 238 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 TAGAPQ8N103 731 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 SLC5A8Q8N695 610 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 CDRT4Q8N9R6 151 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 OR10G2Q8NGC3 310 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 OR9Q2Q8NGE9 314 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 M1APQ8TC57 530 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 METTL21AQ8WXB1 218 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 TSLPQ969D9 159 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 NRBF2Q96F24 287 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 RMND5BQ96G75 393 aaPredicted RBP9.12□□□□□ -0.95
TPM3-210ENST00000368530 RBM18Q96H35 190 aaKnown RBP9.12□□□□□ -0.95
TPM3-210ENST00000368530 PTCHD1Q96NR3 888 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 RDH12Q96NR8 316 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 MUS81Q96NY9 551 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 DMRTA2Q96SC8 542 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 SPOCK3Q9BQ16 436 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 BTBD2Q9BX70 525 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 PINK1Q9BXM7 581 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 TSPAN10Q9H1Z9 355 aaPredicted RBP9.12□□□□□ -0.95
TPM3-210ENST00000368530 PIGUQ9H490 435 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 FOLH1BQ9HBA9 442 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 MMP25Q9NPA2 562 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 BATF3Q9NR55 127 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 KLHL1Q9NR64 748 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 CTPS2Q9NRF8 586 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 PNO1Q9NRX1 252 aaKnown RBP9.12□□□□□ -0.95
TPM3-210ENST00000368530 LANCL2Q9NS86 450 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 KRT84Q9NSB2 600 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 ACER3Q9NUN7 267 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 FBXO34Q9NWN3 711 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 ANKRD10Q9NXR5 420 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 SLC13A4Q9UKG4 626 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 ITGB1BP2Q9UKP3 347 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 MYRFQ9Y2G1 1151 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 WDR45Q9Y484 360 aa9.12□□□□□ -0.95
TPM3-210ENST00000368530 CENPVL1A0A0U1RR11 272 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 DPPA5A6NC42 116 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 H0YAE9 185 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 FFAR1O14842 300 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 COQ9O75208 318 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 SLITRK5O94991 958 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 CCNB2O95067 398 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 S1PR1P21453 382 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 SSTR2P30874 369 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 STT3AP46977 705 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 SMSP52788 366 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 HSD17B7P56937 341 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 MAP4K2Q12851 820 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 EPS8Q12929 822 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 OR1C1Q15619 314 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 NNATQ16517 81 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 MICAQ29983 383 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 TUSC1Q2TAM9 212 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 ARHGAP11BQ3KRB8 267 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 TTC23Q5W5X9 447 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 KDM4DQ6B0I6 523 aa9.11□□□□□ -0.95
TPM3-210ENST00000368530 TYW3Q6IPR3 259 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms