RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 ACSM2AQ08AH3 577 aa12.22□□□□□ -0.45
NCSTN-202ENST00000368063 ELAVL2Q12926 359 aaKnown RBP12.22□□□□□ -0.45
NCSTN-202ENST00000368063 DEFB115Q30KQ5 88 aa12.22□□□□□ -0.45
NCSTN-202ENST00000368063 MS4A13Q5J8X5 152 aa12.22□□□□□ -0.45
NCSTN-202ENST00000368063 ACSM2BQ68CK6 577 aa12.22□□□□□ -0.45
NCSTN-202ENST00000368063 TSSK4Q6SA08 328 aa12.22□□□□□ -0.45
NCSTN-202ENST00000368063 LBX2Q6XYB7 198 aa12.22□□□□□ -0.45
NCSTN-202ENST00000368063 ZNF813Q6ZN06 617 aa12.22□□□□□ -0.45
NCSTN-202ENST00000368063 LINGO2Q7L985 606 aa12.22□□□□□ -0.45
NCSTN-202ENST00000368063 KCNRGQ8N5I3 272 aa12.22□□□□□ -0.45
NCSTN-202ENST00000368063 IGSF8Q969P0 613 aa12.22□□□□□ -0.45
NCSTN-202ENST00000368063 ZC3H10Q96K80 434 aaKnown RBP12.22□□□□□ -0.45
NCSTN-202ENST00000368063 REEP4Q9H6H4 257 aa12.22□□□□□ -0.45
NCSTN-202ENST00000368063 KLHL1Q9NR64 748 aa12.22□□□□□ -0.45
NCSTN-202ENST00000368063 PCDHGC4Q9Y5F7 938 aa12.22□□□□□ -0.45
NCSTN-202ENST00000368063 PCDHGA1Q9Y5H4 931 aa12.22□□□□□ -0.45
NCSTN-202ENST00000368063 ANKRD20A5PA0PJZ0 165 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 PYCARD-AS1I3L0S3 204 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 TGM5O43548 720 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 PEX10O60683 326 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 ATP1B1P05026 303 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 ASGR2P07307 311 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 APEHP13798 732 aaKnown RBP12.21□□□□□ -0.45
NCSTN-202ENST00000368063 UQCRC2P22695 453 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 ITGA3P26006 1051 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 AOAHP28039 575 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 CASP6P55212 293 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 CACNG1Q06432 222 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 LRRC74AQ0VAA2 488 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 NFATC2Q13469 925 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 LINGO4Q6UY18 593 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 DNAAF1Q8NEP3 725 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 OR4K5Q8NGD3 323 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 ACOT11Q8WXI4 607 aaPredicted RBP12.21□□□□□ -0.45
NCSTN-202ENST00000368063 MEGF10Q96KG7 1140 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 NAA11Q9BSU3 229 aaPredicted RBP12.21□□□□□ -0.45
NCSTN-202ENST00000368063 A4GNTQ9UNA3 340 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 HELZP42694 1942 aaKnown RBP12.21□□□□□ -0.45
NCSTN-202ENST00000368063 IGLV3-10A0A075B6K4 115 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 J3QRE1 110 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 ZNF749O43361 778 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 BCL2L11O43521 198 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 SLC6A12P48065 614 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 AP1S1P61966 158 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 CAP1Q01518 475 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 ERV3-1Q14264 604 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 MAPK14Q16539 360 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 C1orf94Q6P1W5 598 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 SLC29A4Q7RTT9 530 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 CEACAM19Q7Z692 300 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 DNAJB7Q7Z6W7 309 aaPredicted RBP12.21□□□□□ -0.45
NCSTN-202ENST00000368063 NUDT13Q86X67 352 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 SIRT6Q8N6T7 355 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 OR10H5Q8NGA6 315 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 PMM1Q92871 262 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 BHLHE41Q9C0J9 482 aaPredicted RBP12.21□□□□□ -0.45
NCSTN-202ENST00000368063 AP5M1Q9H0R1 490 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 ADARB2Q9NS39 739 aaKnown RBP12.21□□□□□ -0.45
NCSTN-202ENST00000368063 DZANK1Q9NVP4 752 aa12.21□□□□□ -0.45
NCSTN-202ENST00000368063 GABARAPH6UMI1 98 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 SEPT4O43236 478 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 FGF16O43320 207 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 IFNGP01579 166 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 RAB2AP61019 212 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 PLEKHN1Q494U1 663 aaPredicted RBP12.21□□□□□ -0.46
NCSTN-202ENST00000368063 REEP3Q6NUK4 255 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 RPL13AP3Q6NVV1 102 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 REC114Q7Z4M0 266 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 IQCHQ86VS3 1027 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 OR4A4PQ8NGN8 299 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 MARS2Q96GW9 593 aaKnown RBP12.21□□□□□ -0.46
NCSTN-202ENST00000368063 ART5Q96L15 291 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 CNTNAP3BQ96NU0 1288 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 TEAD3Q99594 435 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 ARL15Q9NXU5 204 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 CACNG4Q9UBN1 327 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 KLK11Q9UBX7 282 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 MOKQ9UQ07 419 aa12.21□□□□□ -0.46
NCSTN-202ENST00000368063 A0A1W2PRQ8 180 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 ANXA4P09525 319 aaPredicted RBP12.2□□□□□ -0.46
NCSTN-202ENST00000368063 NQO2P16083 231 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 CD22P20273 847 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 LHX1P48742 406 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 SMIM11AP58511 58 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 DDX39BQ13838 428 aaKnown RBP12.2□□□□□ -0.46
NCSTN-202ENST00000368063 RAB12Q6IQ22 244 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 CDPF1Q6NVV7 123 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 ZNF546Q86UE3 836 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 CMTM4Q8IZR5 234 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 CLDN19Q8N6F1 224 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 NLGN2Q8NFZ4 835 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 RFKQ969G6 155 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 C14orf79Q96F83 325 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 PINK1Q9BXM7 581 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 TMEM185BQ9H7F4 350 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 MAN2C1Q9NTJ4 1040 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 POLR2AP24928 1970 aaKnown RBP12.2□□□□□ -0.46
NCSTN-202ENST00000368063 KANTRA0A1W2PQU2 76 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 GLTPD2A6NH11 291 aa12.2□□□□□ -0.46
NCSTN-202ENST00000368063 ETHE1O95571 254 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms