RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 DAPK2Q9UIK4 370 aa11.12□□□□□ -0.63
USF1-203ENST00000368021 ATMQ13315 3056 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 CLDN24A6NM45 220 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 CDRT15L2A8MXV6 281 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 CLDN25C9JDP6 229 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 FMO6PO60774 539 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 KLF7O75840 302 aaPredicted RBP11.11□□□□□ -0.63
USF1-203ENST00000368021 DXOO77932 396 aaKnown RBP11.11□□□□□ -0.63
USF1-203ENST00000368021 RFX3P48380 749 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 ADARB1P78563 741 aaKnown RBP11.11□□□□□ -0.63
USF1-203ENST00000368021 TAGLNQ01995 201 aaKnown RBP11.11□□□□□ -0.63
USF1-203ENST00000368021 FOXD4Q12950 439 aaPredicted RBP11.11□□□□□ -0.63
USF1-203ENST00000368021 PIN1Q13526 163 aaPredicted RBP11.11□□□□□ -0.63
USF1-203ENST00000368021 NNATQ16517 81 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 PAPD4Q6PIY7 484 aaKnown RBP11.11□□□□□ -0.63
USF1-203ENST00000368021 ATG16L2Q8NAA4 619 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 KDF1Q8NAX2 398 aaPredicted RBP11.11□□□□□ -0.63
USF1-203ENST00000368021 OR10G2Q8NGC3 310 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 OR2Y1Q8NGV0 311 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 OR8K3Q8NH51 312 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 NUBPLQ8TB37 319 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 TP53INP1Q96A56 240 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 C12orf43Q96C57 262 aaKnown RBP11.11□□□□□ -0.63
USF1-203ENST00000368021 VMP1Q96GC9 406 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 ALPK1Q96QP1 1244 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 GAL3ST4Q96RP7 486 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 FUZQ9BT04 418 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 FNDC11Q9BVV2 318 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 SPRY4Q9C004 299 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 B3GNT4Q9C0J1 378 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 ANKRD19PQ9H560 264 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 KIF17Q9P2E2 1029 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 PADI1Q9ULC6 663 aa11.11□□□□□ -0.63
USF1-203ENST00000368021 NPIPA5A0A0B4J1W7 369 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 IGHV3-20A0A0C4DH32 117 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 NPIPA7E9PJI5 369 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 FAAHO00519 579 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 AP3D1O14617 1153 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 TPST2O60704 377 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 CCNB2O95067 398 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 CCNYL3P0C7X3 344 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 NPIPA8P0DM63 369 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 MYF6P23409 242 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 ELAVL4P26378 380 aaKnown RBP11.1□□□□□ -0.63
USF1-203ENST00000368021 RNF4P78317 190 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 FGFBP1Q14512 234 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 TGIF1Q15583 401 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 DCST1Q5T197 706 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 PDZK1Q5T2W1 519 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 TTC23Q5W5X9 447 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 C6orf15Q6UXA7 325 aaPredicted RBP11.1□□□□□ -0.63
USF1-203ENST00000368021 HSDL2Q6YN16 418 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 USP51Q70EK9 711 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 HDDC2Q7Z4H3 204 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 AKAP14Q86UN6 197 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 RANBP3LQ86VV4 465 aaPredicted RBP11.1□□□□□ -0.63
USF1-203ENST00000368021 CLVS1Q8IUQ0 354 aaPredicted RBP11.1□□□□□ -0.63
USF1-203ENST00000368021 LINC00471Q8N535 108 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 CYGBQ8WWM9 190 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 DIO2Q92813 273 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 ZNF486Q96H40 463 aaPredicted RBP11.1□□□□□ -0.63
USF1-203ENST00000368021 CNBD2Q96M20 576 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 TOR3AQ9H497 397 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.1□□□□□ -0.63
USF1-203ENST00000368021 RHCGQ9UBD6 479 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 KCNN3Q9UGI6 736 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 TMCC3Q9ULS5 477 aa11.1□□□□□ -0.63
USF1-203ENST00000368021 SNTNA6NMZ2 147 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 FRS3O43559 492 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 MAN1A2O60476 641 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 OR5F1O95221 314 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 UMODP07911 640 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 RAB40ALP0C0E4 278 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 ITGAMP11215 1152 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 ADH7P40394 386 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 EIF2S3P41091 472 aaKnown RBP11.09□□□□□ -0.63
USF1-203ENST00000368021 ZNF136P52737 540 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 TAS2R41P59536 307 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 ST3GAL3Q11203 375 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 ATP1A4Q13733 1029 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 ANKRD34AQ69YU3 496 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 ZNF770Q6IQ21 691 aaPredicted RBP11.09□□□□□ -0.63
USF1-203ENST00000368021 TSPYL5Q86VY4 417 aaPredicted RBP11.09□□□□□ -0.63
USF1-203ENST00000368021 CCDC28AQ8IWP9 274 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 SLC34A3Q8N130 599 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 ZNF527Q8NB42 609 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 SLC7A13Q8TCU3 470 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 RAB2BQ8WUD1 216 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 FEVQ99581 238 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 FAM117AQ9C073 453 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 UBQLN4Q9NRR5 601 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 KRT84Q9NSB2 600 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 MAN2C1Q9NTJ4 1040 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 FAM118AQ9NWS6 357 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 DKK4Q9UBT3 224 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 TESQ9UGI8 421 aaKnown RBP11.09□□□□□ -0.63
USF1-203ENST00000368021 ZNF223Q9UK11 482 aaPredicted RBP11.09□□□□□ -0.63
USF1-203ENST00000368021 PTRH2Q9Y3E5 179 aaKnown RBP11.09□□□□□ -0.63
USF1-203ENST00000368021 TRBV4-1A0A0J9YWV2 114 aa11.09□□□□□ -0.63
USF1-203ENST00000368021 A0A1W2PQ72 361 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms