RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ZNF700Q9H0M5 742 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 SEMA4GQ9NTN9 838 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 PAPPA2Q9BXP8 1791 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 A0A1W2PQU0 124 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 GPR39O43194 453 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 TPT1P13693 172 aaKnown RBP11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 PSPHP78330 225 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 CDK3Q00526 305 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 SYT14P1Q58G82 188 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 WDR88Q6ZMY6 472 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 TSTD1Q8NFU3 115 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 ZFAND1Q8TCF1 268 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 ZNF419Q96HQ0 510 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 SEC61A2Q9H9S3 476 aa11.06□□□□□ -0.64
CDC42BPA-202ENST00000366764 GFYI3L273 518 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 GFRA2O00451 464 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 ATXN7L3Q14CW9 347 aaPredicted RBP11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 CTF1Q16619 201 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 PUS10Q3MIT2 529 aaKnown RBP11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 SFXN4Q6P4A7 337 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 CSO75390 466 aaKnown RBP11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 ALX3O95076 343 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 PPP1R3DO95685 299 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 CPEP16870 476 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 LEG1Q6P5S2 330 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 LSM14AQ8ND56 463 aaKnown RBP11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR5M3Q8NGP4 307 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 CASD1Q96PB1 797 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 ABCG4Q9H172 646 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 TRBV5-4A0A0C4DH59 114 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 ADH7P40394 386 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 WBP2NLQ6ICG8 309 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 PRRG4Q9BZD6 226 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 C5AR2Q9P296 337 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 SIPA1L1O43166 1804 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 ZAR1LA6NP61 321 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 M0R129 80 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 TNFRSF10AO00220 468 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 HLA-FP30511 346 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 S100A12P80511 92 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 GFOD2Q3B7J2 385 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 NANOGP1Q8N7R0 232 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 PNPLA1Q8N8W4 532 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 TRIM43Q96BQ3 446 aaPredicted RBP11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 C4orf36Q96KX1 117 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 PBX2P40425 430 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 PFN3P60673 137 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 KCNJ10P78508 379 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 GSKIPQ9P0R6 139 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 ADAM23O75077 832 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 C1QAP02745 245 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 CD3GP09693 182 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 KCNJ5P48544 419 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 TAGLNQ01995 201 aaKnown RBP11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 PLCXD2Q0VAA5 305 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 ENTPD8Q5MY95 495 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 FAM71E1Q6IPT2 247 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 LPCAT3Q6P1A2 487 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 CLSTN3Q9BQT9 956 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 MS4A8Q9BY19 250 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 PPT2Q9UMR5 302 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 SNX11Q9Y5W9 270 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 FXYD6P3P58550 94 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 ELOCQ15369 112 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR4F15Q8NGB8 312 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 SLC25A37Q9NYZ2 338 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 CLRN1P58418 232 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 RPS25P62851 125 aaKnown RBP11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 ACER3Q9NUN7 267 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 C2orf42Q9NWW7 574 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 TRAPPC4Q9Y296 219 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 AK6Q9Y3D8 172 aaKnown RBP11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 A0A1W2PP55 124 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 A0A1W2PPK0 400 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR6C74A6NCV1 312 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 GRXCR1A8MXD5 290 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 RAB3DO95716 219 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 CSF2RAP15509 400 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 ALG10Q5BKT4 473 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR5L2Q8NGL0 311 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 MS4A4AQ96JQ5 239 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 NUMBLQ9Y6R0 609 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 SCN10AQ9Y5Y9 1956 aa11.05□□□□□ -0.64
CDC42BPA-202ENST00000366764 FAM83FQ8NEG4 500 aaPredicted RBP11.04□□□□□ -0.64
CDC42BPA-202ENST00000366764 NOX3Q9HBY0 568 aa11.04□□□□□ -0.64
CDC42BPA-202ENST00000366764 PDE7BQ9NP56 450 aa11.04□□□□□ -0.64
CDC42BPA-202ENST00000366764 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.04□□□□□ -0.64
CDC42BPA-202ENST00000366764 ZNF860A6NHJ4 632 aa11.04□□□□□ -0.64
CDC42BPA-202ENST00000366764 RAD51DO75771 328 aa11.04□□□□□ -0.64
CDC42BPA-202ENST00000366764 SNAPINO95295 136 aa11.04□□□□□ -0.64
CDC42BPA-202ENST00000366764 HES5Q5TA89 166 aa11.04□□□□□ -0.64
CDC42BPA-202ENST00000366764 FIP1L1Q6UN15 594 aaKnown RBP11.04□□□□□ -0.64
CDC42BPA-202ENST00000366764 CALHM3Q86XJ0 350 aa11.04□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR5T2Q8NGG2 359 aa11.04□□□□□ -0.64
CDC42BPA-202ENST00000366764 GIMAP5Q96F15 307 aa11.04□□□□□ -0.64
CDC42BPA-202ENST00000366764 GMEB2Q9UKD1 530 aa11.04□□□□□ -0.64
CDC42BPA-202ENST00000366764 POU2F3Q9UKI9 436 aa11.04□□□□□ -0.64
CDC42BPA-202ENST00000366764 RNGTTO60942 597 aaKnown RBP11.04□□□□□ -0.64
CDC42BPA-202ENST00000366764 RDH16O75452 317 aa11.04□□□□□ -0.64
CDC42BPA-202ENST00000366764 MAS1P04201 325 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms