RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ZBTB9Q96C00 473 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 NEURL3Q96EH8 262 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 SLC35G5Q96KT7 338 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 MED18Q9BUE0 208 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 LAT2Q9GZY6 243 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 OR51I1Q9H343 314 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 KCNK9Q9NPC2 374 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 BTNL2Q9UIR0 455 aa12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ING1Q9UK53 422 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 RAI1Q7Z5J4 1906 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PRAMEF27A3QJZ7 478 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 GTPBP1O00178 669 aaKnown RBP12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 KLF4O43474 513 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 KIAA0513O60268 411 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 SYNGR4O95473 234 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PLGP00747 810 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 UBL4AP11441 157 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 IL12AP29459 219 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 SFTPDP35247 375 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 KCNJ5P48544 419 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 CLNS1AP54105 237 aaKnown RBP12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 CTBP2P56545 445 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PLAURQ03405 335 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 FOXD4Q12950 439 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 QPRTQ15274 297 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 GPR68Q15743 365 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 TMEM176BQ3YBM2 270 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 GTF2IRD2BQ6EKJ0 949 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 TYW3Q6IPR3 259 aaKnown RBP12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 BEND4Q6ZU67 534 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 GTF2IRD2Q86UP8 949 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ROBO4Q8WZ75 1007 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 CPNE4Q96A23 557 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ZG16BQ96DA0 208 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 CCDC115Q96NT0 180 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 HS3ST6Q96QI5 342 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 OR10A4Q9H209 315 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 CENPHQ9H3R5 247 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 GP6Q9HCN6 339 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 POLE3Q9NRF9 147 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 AIG1Q9NVV5 245 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 BEX4Q9NWD9 120 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 MKLN1Q9UL63 735 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PCDHGB4Q9UN71 923 aa12.19□□□□□ -0.46
TNFRSF1A-202ENST00000366159 E9PBE3 544 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 BCAS1O75363 584 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 GCM2O75603 506 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 NUDT14O95848 222 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 AGR2O95994 175 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PABPC4LP0CB38 370 aaKnown RBP12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 OR12D1P0DN82 309 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PPP3CBP16298 524 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PSMB1P20618 241 aaKnown RBP12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PGM1P36871 562 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 CASP9P55211 416 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 UFM1P61960 85 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 SELENBP1Q13228 472 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 CBFBQ13951 182 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 RNPS1Q15287 305 aaKnown RBP12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 FAM174BQ3ZCQ3 159 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ANKRD34AQ69YU3 496 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 FRRS1Q6ZNA5 592 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 VPS37AQ8NEZ2 397 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ZFP90Q8TF47 636 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ABHD3Q8WU67 409 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 XAGE5Q8WWM1 108 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 IGFBPL1Q8WX77 278 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PIK3IP1Q96FE7 263 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 MAELQ96JY0 434 aaKnown RBP12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PIP5K1AQ99755 562 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 THUMPD3Q9BV44 507 aaKnown RBP12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 KLHL4Q9C0H6 718 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 TIGARQ9NQ88 270 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 EXD2Q9NVH0 621 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 THAP1Q9NVV9 213 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 GPR45Q9Y5Y3 372 aa12.18□□□□□ -0.46
TNFRSF1A-202ENST00000366159 TMEM120BA0PK00 339 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 GJE1A6NN92 205 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 HDAC3O15379 428 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 CPSF4O95639 269 aaKnown RBP12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 FOSL1P15407 271 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 RAC3P60763 192 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 EXOC3L2Q2M3D2 409 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 PPP4R4Q6NUP7 873 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 TNFAIP8L2Q6P589 184 aaPredicted RBP12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 TFAP2EQ6VUC0 442 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 EIF3MQ7L2H7 374 aaKnown RBP12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 FCRLAQ7L513 359 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 NUFIP2Q7Z417 695 aaKnown RBP12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 SPATA19Q7Z5L4 167 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 TUSC5Q8IXB3 177 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 GABRG1Q8N1C3 465 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ZNF614Q8N883 585 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 WFDC11Q8NEX6 87 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 RAB3IL1Q8TBN0 382 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ST8SIA1Q92185 356 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 RAB8BQ92930 207 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 ROPN1LQ96C74 230 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 TLCD1Q96CP7 247 aa12.17□□□□□ -0.46
TNFRSF1A-202ENST00000366159 BCO1Q9HAY6 547 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms