RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ARCQ7LC44 396 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 LHFPL4Q7Z7J7 247 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 ZNF429Q86V71 674 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 ZNF561Q8N587 486 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 SLC5A11Q8WWX8 675 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 RNF185Q96GF1 192 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 HPDLQ96IR7 371 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 B3GNT2Q9NY97 397 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 MRPL39Q9NYK5 338 aaKnown RBP2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 MTRF1LQ9UGC7 380 aaKnown RBP2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 DCDC2Q9UHG0 476 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 BTNL2Q9UIR0 455 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 ANAPC7Q9UJX3 599 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 TP53TG5Q9Y2B4 290 aa2.63□□□□□ -1.99
RNU4-28P-201ENST00000364739 ANKRD30BLA7E2S9 258 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 GFYI3L273 518 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 SDHDO14521 159 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 OR10H3O60404 316 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 ZNF780AO75290 641 aaPredicted RBP2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 SNAPINO95295 136 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 WISP3O95389 354 aaPredicted RBP2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 GCFC2P16383 781 aaKnown RBP2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 PAICSP22234 425 aaKnown RBP2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 AXLP30530 894 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 MTTPP55157 894 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 SPP2Q13103 211 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 MADCAM1Q13477 382 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 GAMTQ14353 236 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 TRIP10Q15642 601 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 MAPK6Q16659 721 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 SLC10A5Q5PT55 438 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 LIPNQ5VXI9 398 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 ACSM5Q6NUN0 579 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 KIR2DL5BQ8NHK3 375 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 TMEM158Q8WZ71 300 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 PGLYRP4Q96LB8 373 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 SAMD8Q96LT4 415 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 SCRT1Q9BWW7 348 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 CRNKL1Q9BZJ0 848 aaKnown RBP2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 NTN4Q9HB63 628 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 AIG1Q9NVV5 245 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 RDH8Q9NYR8 311 aa2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 KIF26AQ9ULI4 1882 aaPredicted RBP2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 SPAG9O60271 1321 aaKnown RBP2.62□□□□□ -1.99
RNU4-28P-201ENST00000364739 PTCH1Q13635 1447 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 IGKV2-28A0A075B6P5 120 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 A0A0U1RQV5 110 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 FAM230AA0A1W2PPH8 454 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 TRIM64A6NGJ6 449 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 TRIM64BA6NI03 449 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 PP2D1A8MPX8 630 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 SSX5O60225 188 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 FAM189A1O60320 539 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 ICOSLGO75144 302 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 TOM1L1O75674 476 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 TNFSF13O75888 250 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 SLITRK3O94933 977 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 PTBP3O95758 552 aaKnown RBP2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 IGKV2D-28P01615 120 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 CLUP10909 449 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 PTGFRP43088 359 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 HNRNPA3P51991 378 aaKnown RBP2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 PFN3P60673 137 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 ARFRP1Q13795 201 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 ATXN7L3Q14CW9 347 aaPredicted RBP2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 CEBPEQ15744 281 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 ACP7Q6ZNF0 438 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 KDM8Q8N371 416 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 TPRX1Q8N7U7 411 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 BCORP1Q8N888 145 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 DNAJA4Q8WW22 397 aaPredicted RBP2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 RASL11BQ9BPW5 248 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 KLHDC3Q9BQ90 382 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 RAB17Q9H0T7 212 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 AGPAT5Q9NUQ2 364 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 ZNF282Q9UDV7 671 aaPredicted RBP2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 RNF6Q9Y252 685 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 SLCO1B1Q9Y6L6 691 aa2.61□□□□□ -1.99
RNU4-28P-201ENST00000364739 ESYT2A0FGR8 921 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 B3GAT3O94766 335 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 IGF1P05019 195 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 RPS2P15880 293 aaKnown RBP2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 CALB2P22676 271 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 BIDP55957 195 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 CCDC173Q0VFZ6 552 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 KCTD19Q17RG1 926 aaPredicted RBP2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 LINC01620Q4KN68 170 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 ARSKQ6UWY0 536 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 ISLR2Q6UXK2 745 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 APTXQ7Z2E3 356 aaKnown RBP2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 ANKRD37Q7Z713 158 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 CBWD2Q8IUF1 395 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 PNKDQ8N490 385 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 OR52B4Q8NGK2 314 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 PIGCQ92535 297 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 TMEM237Q96Q45 408 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 DHX33Q9H6R0 707 aaKnown RBP2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 POLD4Q9HCU8 107 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 TREM2Q9NZC2 230 aa2.6□□□□□ -1.99
RNU4-28P-201ENST00000364739 NEUROG3Q9Y4Z2 214 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms