RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 YJEFN3A6XGL0 299 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 E7ENQ6 273 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 CHEK1O14757 476 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 GRID2O43424 1007 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 TNFSF12O43508 249 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 CSO75390 466 aaKnown RBP4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 OR6B1O95007 311 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 DUS4LO95620 317 aaKnown RBP4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 IGKV3-20P01619 116 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 AKT2P31751 481 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 CAMLGP49069 296 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 CCL11P51671 97 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 LIMK2P53671 638 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 SSTP61278 116 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 YWHAGP61981 247 aaKnown RBP eCLIP4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 SNRPFP62306 86 aaKnown RBP4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 LY6DQ14210 128 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 EXOSC7Q15024 291 aaKnown RBP4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 CARTPTQ16568 116 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 KNOP1Q1ED39 458 aaKnown RBP4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 CMPK2Q5EBM0 449 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 C9orf64Q5T6V5 341 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 RFWD3Q6PCD5 774 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 ZNF730Q6ZMV8 503 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 ZNF329Q86UD4 541 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 OR4N5Q8IXE1 308 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 PARP8Q8N3A8 854 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 ZNF248Q8NDW4 579 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 ANKRD20A12PQ8NF67 263 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 NUP37Q8NFH4 326 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 DDI1Q8WTU0 396 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 TBC1D31Q96DN5 1066 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 TMA16Q96EY4 203 aaKnown RBP4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 SAMD8Q96LT4 415 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 RAB40CQ96S21 281 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 COQ7Q99807 217 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 PINK1Q9BXM7 581 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 BARHL1Q9BZE3 327 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 ULBP1Q9BZM6 244 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 KCNK13Q9HB14 408 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 SGK2Q9HBY8 427 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 FBXL12Q9NXK8 326 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 ACTR3BQ9P1U1 418 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 GGA2Q9UJY4 613 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 CA5BQ9Y2D0 317 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 MRPS18CQ9Y3D5 142 aaKnown RBP4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 CLCA3PQ9Y6N3 262 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 U3KQA8 63 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 NOTCH2Q04721 2471 aa4.69□□□□□ -1.66
RNU4-39P-201ENST00000362455 ANAPC1Q9H1A4 1944 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 MYO18AQ92614 2054 aaKnown RBP4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 BOD1L1Q8NFC6 3051 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 IGHV3-20A0A0C4DH32 117 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 IQCMA0A1B0GVH7 501 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 TMEM89A2RUT3 159 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 PRR23D1E9PI22 279 aaPredicted RBP4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 RASGRF2O14827 1237 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 LATO43561 262 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 KIAA0513O60268 411 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 SDC3O75056 442 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 NXPH4O95158 308 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 OR6A2O95222 327 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 SYNGR4O95473 234 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 IGLV3-27P01718 113 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 ZSCAN5DPP0CG00 497 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 TRIM49P0CI25 452 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 TRIM49CP0CI26 452 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 PRR23D2P0DMB1 279 aaPredicted RBP4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 RALAP11233 206 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 DRD3P35462 400 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 ALDH3B1P43353 468 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 GCLMP48507 274 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 NUMBP49757 651 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 TKTL1P51854 596 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 CRIP2P52943 208 aaPredicted RBP4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 AP3M2P53677 418 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 ABCE1P61221 599 aaKnown RBP4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 TRADDQ15628 312 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 CST6Q15828 149 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 HNRNPA1L2Q32P51 320 aaKnown RBP4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 RTL6Q6ICC9 239 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 NEPROQ6NW34 567 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 RBM43Q6ZSC3 357 aaKnown RBP4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 BNIPLQ7Z465 357 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 MMAAQ8IVH4 418 aaKnown RBP4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 OR10G7Q8NGN6 311 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 C11orf45Q8TAV5 145 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 HCAR2Q8TDS4 363 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 TAF4BQ92750 862 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 MRPL24Q96A35 216 aaKnown RBP4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 FAM131CQ96AQ9 280 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 C16orf58Q96GQ5 468 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 NSMCE3Q96MG7 304 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 PRICKLE1Q96MT3 831 aaPredicted RBP4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 UBXN6Q9BZV1 441 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 CYP3A43Q9HB55 503 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 ASCL3Q9NQ33 180 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 GDF3Q9NR23 364 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 HOMER3Q9NSC5 361 aa4.68□□□□□ -1.66
RNU4-39P-201ENST00000362455 PLA2G4CQ9UP65 541 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms