RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 KATNBL1Q9H079 304 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 ASB6Q9NWX5 421 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 USP36Q9P275 1121 aaKnown RBP13.08□□□□□ -0.32
SMC5-201ENST00000361138 KLK8O60259 260 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 C1orf105O95561 183 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 TRA2BP62995 288 aaKnown RBP13.08□□□□□ -0.32
SMC5-201ENST00000361138 PDE7AQ13946 482 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 PRSS36Q5K4E3 855 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 IGSF21Q96ID5 467 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 MED20Q9H944 212 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 PLAC1Q9HBJ0 212 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 NRIP3Q9NQ35 241 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 A0A1B0GV50 99 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 TVP23AA6NH52 213 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 C1QAP02745 245 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 EIF2S3LQ2VIR3 472 aaKnown RBP13.08□□□□□ -0.32
SMC5-201ENST00000361138 ZER1Q7Z7L7 766 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 FBXL2Q9UKC9 423 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 BACE2Q9Y5Z0 518 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 A0A0A6YYH2 397 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 A6NJ64 397 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 SCO1O75880 301 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 AWAT2Q6E213 333 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 GLCCI1Q86VQ1 547 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 OR52N1Q8NH53 320 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 CREB3L4Q8TEY5 395 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 SRRQ9GZT4 340 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 IKZF5Q9H5V7 419 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 PRODH2Q9UF12 536 aa13.08□□□□□ -0.32
SMC5-201ENST00000361138 TNFP01375 233 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 INHAP05111 366 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 CHATP28329 748 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 ARF3P61204 181 aaPredicted RBP13.07□□□□□ -0.32
SMC5-201ENST00000361138 ARF1P84077 181 aaKnown RBP13.07□□□□□ -0.32
SMC5-201ENST00000361138 AVPI1Q5T686 147 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 HENMT1Q5T8I9 393 aaKnown RBP13.07□□□□□ -0.32
SMC5-201ENST00000361138 SLC6A19Q695T7 634 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 C12orf40Q86WS4 652 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 ESX1Q8N693 406 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 SLC25A44Q96H78 314 aaPredicted RBP13.07□□□□□ -0.32
SMC5-201ENST00000361138 MAP6Q96JE9 813 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 HIST1H2AAQ96QV6 131 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 ACER3Q9NUN7 267 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 STRCP1A6NGW2 1772 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 MYH9P35579 1960 aaKnown RBP13.07□□□□□ -0.32
SMC5-201ENST00000361138 GPR89AB7ZAQ6 455 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 GAPDHSO14556 408 aaPredicted RBP13.07□□□□□ -0.32
SMC5-201ENST00000361138 OIP5O43482 229 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 FADS1O60427 444 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 GPR89BP0CG08 455 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 CTXN1P60606 82 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 NKX6-1P78426 367 aaPredicted RBP13.07□□□□□ -0.32
SMC5-201ENST00000361138 GSX2Q9BZM3 304 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 SDHAF3Q9NRP4 125 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 SOX9P48436 509 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 ACVR1Q04771 509 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 IRF4Q15306 451 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 STK35Q8TDR2 534 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 RBP7Q96R05 134 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 PITHD1Q9GZP4 211 aaPredicted RBP13.07□□□□□ -0.32
SMC5-201ENST00000361138 P2RY12Q9H244 342 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 PRTFDC1Q9NRG1 225 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 TRAPPC4Q9Y296 219 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 ZNF281Q9Y2X9 895 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 TMEM129A0AVI4 362 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 RAB3AP20336 220 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 PER3P56645 1201 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 KIAA1024LP59773 190 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 IL13RA1P78552 427 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 SIM1P81133 766 aaPredicted RBP13.07□□□□□ -0.32
SMC5-201ENST00000361138 AANATQ16613 207 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 ZBTB44Q8NCP5 570 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 ZNF480Q8WV37 535 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 KLHL15Q96M94 604 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 HRH4Q9H3N8 390 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 APMAPQ9HDC9 416 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 PRMT8Q9NR22 394 aaPredicted RBP13.07□□□□□ -0.32
SMC5-201ENST00000361138 OR1A2Q9Y585 309 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 TRABD2BA6NFA1 517 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 ZAR1LA6NP61 321 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 TNFRSF10BO14763 440 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 FBXO45P0C2W1 286 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 ZNF865P0CJ78 1059 aaPredicted RBP13.07□□□□□ -0.32
SMC5-201ENST00000361138 CLUP10909 449 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 GZMKP49863 264 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 SCGB1C1Q8TD33 95 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 PITX2Q99697 317 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 ARPC5LQ9BPX5 153 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 KLF16Q9BXK1 252 aaPredicted RBP13.07□□□□□ -0.32
SMC5-201ENST00000361138 ERVMER34-1Q9H9K5 563 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 NRAPQ86VF7 1730 aa13.07□□□□□ -0.32
SMC5-201ENST00000361138 ASPDHA6ND91 283 aa13.06□□□□□ -0.32
SMC5-201ENST00000361138 RHPN2P1A8MT19 583 aa13.06□□□□□ -0.32
SMC5-201ENST00000361138 P2RX6O15547 441 aa13.06□□□□□ -0.32
SMC5-201ENST00000361138 HLA-AP01891 365 aaKnown RBP13.06□□□□□ -0.32
SMC5-201ENST00000361138 C1SP09871 688 aa13.06□□□□□ -0.32
SMC5-201ENST00000361138 HOXD9P28356 352 aaPredicted RBP13.06□□□□□ -0.32
SMC5-201ENST00000361138 ZNF585AQ6P3V2 769 aa13.06□□□□□ -0.32
SMC5-201ENST00000361138 SLC51BQ86UW2 128 aa13.06□□□□□ -0.32
SMC5-201ENST00000361138 SLC35F3Q8IY50 421 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms