RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 TACR3P29371 465 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 IDUAP35475 653 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 RAB11AP62491 216 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 OLIG2Q13516 323 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 MISPQ8IVT2 679 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 NLGN4XQ8N0W4 816 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 IQCF1Q8N6M8 205 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 CA14Q9ULX7 337 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 PRSS38A1L453 326 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 GJB5O95377 273 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 OSMP13725 252 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 CNTN4Q8IWV2 1026 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 CMIPQ8IY22 773 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 BEST4Q8NFU0 473 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 MICU1Q9BPX6 476 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 KCNK12Q9HB15 430 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 NPIPA7E9PJI5 369 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 GAPDHSO14556 408 aaPredicted RBP9.11□□□□□ -0.95
CUX1-203ENST00000360264 NPIPA8P0DM63 369 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 WNT4P56705 351 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 UBE2G2P60604 165 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 LAPTM4AQ15012 233 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 KIAA1211LQ6NV74 962 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 MAMDC4Q6UXC1 1216 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 TYROBPO43914 113 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 EIF1BO60739 113 aaKnown RBP9.11□□□□□ -0.95
CUX1-203ENST00000360264 PRSS3P35030 304 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 IRF4Q15306 451 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 UNC50Q53HI1 259 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 BRIX1Q8TDN6 353 aaKnown RBP9.11□□□□□ -0.95
CUX1-203ENST00000360264 MMACHCQ9Y4U1 282 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 PCYT1BQ9Y5K3 369 aaPredicted RBP9.11□□□□□ -0.95
CUX1-203ENST00000360264 CATR1Q13166 79 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 KLBQ86Z14 1044 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 MYLIPQ8WY64 445 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 UHRF2Q96PU4 802 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 WRAP73Q9P2S5 460 aaPredicted RBP9.11□□□□□ -0.95
CUX1-203ENST00000360264 CBLCQ9ULV8 474 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 NSG1A0A0A6YYJ2 146 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 DVL2O14641 736 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 SLC22A5O76082 557 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 PTGER4P35408 488 aa9.11□□□□□ -0.95
CUX1-203ENST00000360264 CMSS1Q9BQ75 279 aaKnown RBP9.11□□□□□ -0.95
CUX1-203ENST00000360264 EEF1E1-BLOC1S5C9J1V9 151 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 TIMP2P16035 220 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 C3orf38Q5JPI3 329 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 ANKLE1Q8NAG6 615 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 FAM71F1Q96KD3 344 aaPredicted RBP9.1□□□□□ -0.95
CUX1-203ENST00000360264 RNF39Q9H2S5 420 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 SLAMF7Q9NQ25 335 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 RGPD2P0DJD1 1756 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 NAV3Q8IVL0 2385 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 LRRC30A6NM36 301 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 RRP8O43159 456 aaKnown RBP9.1□□□□□ -0.95
CUX1-203ENST00000360264 DCNP07585 359 aaKnown RBP9.1□□□□□ -0.95
CUX1-203ENST00000360264 C1orf61Q13536 156 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 LPCAT3Q6P1A2 487 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 DPPA4Q7L190 304 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 NALCNQ8IZF0 1738 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CEBPZOSA8MTT3 80 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 E7ESA3 106 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 VEZF1Q14119 521 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 SLC10A1Q14973 349 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 ANKRD54Q6NXT1 300 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 ZC3H3Q8IXZ2 948 aaKnown RBP9.1□□□□□ -0.95
CUX1-203ENST00000360264 TMEM239Q8WW34 195 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 FAM212BQ9NTI7 297 aaPredicted RBP9.1□□□□□ -0.95
CUX1-203ENST00000360264 FAM155AB1AL88 458 aaPredicted RBP9.1□□□□□ -0.95
CUX1-203ENST00000360264 HIST1H1TP22492 207 aaPredicted RBP9.1□□□□□ -0.95
CUX1-203ENST00000360264 NKX6-1P78426 367 aaPredicted RBP9.1□□□□□ -0.95
CUX1-203ENST00000360264 KCNJ8Q15842 424 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 SAV1Q9H4B6 383 aaPredicted RBP9.1□□□□□ -0.95
CUX1-203ENST00000360264 BIN3Q9NQY0 253 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CNOT2Q9NZN8 540 aaKnown RBP9.1□□□□□ -0.95
CUX1-203ENST00000360264 TET1Q8NFU7 2136 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CCDC163A0A0D9SF12 145 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 LOC285095A0A1B0GVY8 99 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 NFATC4Q14934 902 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 OPN5Q6U736 354 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 SDSLQ96GA7 329 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CCDC106Q9BWC9 280 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 EGLN1Q9GZT9 426 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 HIF1ANQ9NWT6 349 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 TRBV11-1A0A0K0K1C0 115 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 GDF1P27539 372 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 PDE7AQ13946 482 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 FAM83HQ6ZRV2 1179 aaPredicted RBP9.1□□□□□ -0.95
CUX1-203ENST00000360264 ZFP82Q8N141 532 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CORO2AQ92828 525 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 ACSS1Q9NUB1 689 aaPredicted RBP9.1□□□□□ -0.95
CUX1-203ENST00000360264 GPR83Q9NYM4 423 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 YLPM1P49750 1951 aaKnown RBP9.1□□□□□ -0.95
CUX1-203ENST00000360264 TSTD3H0UI37 97 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 CSF2RAP15509 400 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 MFGE8Q08431 387 aaPredicted RBP9.1□□□□□ -0.95
CUX1-203ENST00000360264 OR7G3Q8NG95 312 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 LMF1Q96S06 567 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 PSAT1Q9Y617 370 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 RAB19A4D1S5 217 aa9.1□□□□□ -0.95
CUX1-203ENST00000360264 LRIT2A6NDA9 550 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms