RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 VASNQ6EMK4 673 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 SULF2Q8IWU5 870 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 GPR26Q8NDV2 337 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 BEST4Q8NFU0 473 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 BPIFA2Q96DR5 249 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 OR7D2Q96RA2 312 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 ENPP5Q9UJA9 477 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 CHRM4P08173 479 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 ABOP16442 354 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 DCTP40126 519 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 C1orf220Q5T0J3 134 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 FAM69AQ5T7M9 428 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 A0A087WUU8 490 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 GABRR3A8MPY1 467 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 KDM4EB2RXH2 506 aaPredicted RBP17.25■□□□□ 0.35
SHANK1-202ENST00000359082 ZNF865P0CJ78 1059 aaPredicted RBP17.25■□□□□ 0.35
SHANK1-202ENST00000359082 ZNF252P-AS1Q0IIN9 211 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 RAB33AQ14088 237 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 SCML1Q9UN30 329 aa17.25■□□□□ 0.35
SHANK1-202ENST00000359082 LOC102725191A0A1B0GVB3 256 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 PLSCR5A0PG75 271 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 B4DXG7 233 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 EFNA3P52797 238 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 SLX4IPQ5VYV7 408 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 FBXO27Q8NI29 283 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 OR51J1Q9H342 316 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 J3KTA2 159 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 TPT1P13693 172 aaKnown RBP17.24■□□□□ 0.35
SHANK1-202ENST00000359082 ZNF44P15621 663 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 CRHBPP24387 322 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 RPS18P62269 152 aaKnown RBP17.24■□□□□ 0.35
SHANK1-202ENST00000359082 MC2RQ01718 297 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 GAB1Q13480 694 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 TMEM40Q8WWA1 233 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 RSPRY1Q96DX4 576 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 PRRC1Q96M27 445 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 CD207Q9UJ71 328 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 CBLCQ9ULV8 474 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 SLC35A3Q9Y2D2 325 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 XRN1Q8IZH2 1706 aaKnown RBP17.24■□□□□ 0.35
SHANK1-202ENST00000359082 NAP1L6A6NFF2 107 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 MMP2P08253 660 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 CTSAP10619 480 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 SDC1P18827 310 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 PSMB5P28074 263 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 IL13RA1P78552 427 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 FAM57BQ71RH2 274 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 LRRTM3Q86VH5 581 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 STEAP2Q8NFT2 490 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 ZNF300Q96RE9 604 aaPredicted RBP17.24■□□□□ 0.35
SHANK1-202ENST00000359082 MROH6A6NGR9 719 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 HOXA11P31270 313 aaPredicted RBP17.24■□□□□ 0.35
SHANK1-202ENST00000359082 CHRNEQ04844 493 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 BEX5Q5H9J7 111 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 MCATQ8IVS2 390 aaKnown RBP17.24■□□□□ 0.35
SHANK1-202ENST00000359082 SHISA4Q96DD7 197 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 ZNF337Q9Y3M9 751 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 ATG4BQ9Y4P1 393 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 KAT6AQ92794 2004 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 PTGESO14684 152 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 SLC16A7O60669 478 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 TSFMP43897 325 aaKnown RBP17.24■□□□□ 0.35
SHANK1-202ENST00000359082 ZP2Q05996 745 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 IL20RBQ6UXL0 311 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 DPPA4Q7L190 304 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 RNF175Q8N4F7 328 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 MFFQ9GZY8 342 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 CUTCQ9NTM9 273 aa17.24■□□□□ 0.35
SHANK1-202ENST00000359082 ANTXRLA6NF34 631 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 CHRNB1P11230 501 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 PRKACAP17612 351 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 TPRA1Q86W33 373 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 ZBTB8AQ96BR9 441 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 ANKRD60Q9BZ19 345 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 FOSL1P15407 271 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 LBX1P52954 281 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 SIX1Q15475 284 aaPredicted RBP17.23■□□□□ 0.35
SHANK1-202ENST00000359082 ZNF587Q96SQ5 575 aaPredicted RBP17.23■□□□□ 0.35
SHANK1-202ENST00000359082 C1QTNF2Q9BXJ5 285 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 ACPTQ9BZG2 426 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 CPNE5Q9HCH3 593 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 A0A1W2PPV4 95 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 CLN5O75503 358 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 HMGN2P05204 90 aaKnown RBP17.23■□□□□ 0.35
SHANK1-202ENST00000359082 MZT1Q08AG7 82 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 PM20D1Q6GTS8 502 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 DCAF13Q9NV06 445 aaKnown RBP17.23■□□□□ 0.35
SHANK1-202ENST00000359082 V9GY05 133 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 ZNF705GA8MUZ8 300 aaPredicted RBP17.23■□□□□ 0.35
SHANK1-202ENST00000359082 HSPB6O14558 160 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 SMAD6O43541 496 aaKnown RBP17.23■□□□□ 0.35
SHANK1-202ENST00000359082 ZIC2O95409 532 aaPredicted RBP17.23■□□□□ 0.35
SHANK1-202ENST00000359082 AHRP35869 848 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 OR1Q1Q15612 314 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 UBE2NLQ5JXB2 153 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 CYS1Q717R9 158 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 NOXA1Q86UR1 476 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 TOE1Q96GM8 510 aaKnown RBP17.23■□□□□ 0.35
SHANK1-202ENST00000359082 ADOQ96SZ5 270 aa17.23■□□□□ 0.35
SHANK1-202ENST00000359082 PRRT1Q99946 306 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms