RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 OR1F2PQ96R84 312 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 TBC1D17Q9HA65 648 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 ATP13A2Q9NQ11 1180 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 HINT3Q9NQE9 182 aaKnown RBP13.74□□□□□ -0.21
GABPB1-202ENST00000359031 CUTCQ9NTM9 273 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 CRNNQ9UBG3 495 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-202ENST00000359031 OR10H1Q9Y4A9 318 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 SPIN1Q9Y657 262 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-202ENST00000359031 CSNK1G3Q9Y6M4 447 aa13.74□□□□□ -0.21
GABPB1-202ENST00000359031 IGHV1OR21-1A0A087WYE8 117 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 EFCAB7A8K855 629 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 TMEM150CB9EJG8 249 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 BCAT2O15382 392 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-202ENST00000359031 OR2B3O76000 313 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 APOL3O95236 402 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 CLPSP04118 112 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 SAGP10523 405 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-202ENST00000359031 PTNP21246 168 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 CSNK1EP49674 416 aaKnown RBP13.73□□□□□ -0.21
GABPB1-202ENST00000359031 AFF3P51826 1226 aaKnown RBP13.73□□□□□ -0.21
GABPB1-202ENST00000359031 HSD11B2P80365 405 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 OXA1LQ15070 435 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 TRIM16LQ309B1 348 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 WDR45BQ5MNZ6 344 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 NKAIN2Q5VXU1 208 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 NIPAL3Q6P499 406 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 ZNF440Q8IYI8 595 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 BCORP1Q8N888 145 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 OR13C2Q8NGS9 318 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 OR52N1Q8NH53 320 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 NUAK2Q9H093 628 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 LANCL2Q9NS86 450 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 SIGLEC7Q9Y286 467 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 TMEM184BQ9Y519 407 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-202ENST00000359031 ADAMTS20P59510 1910 aa13.73□□□□□ -0.21
GABPB1-202ENST00000359031 MN1Q10571 1320 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-202ENST00000359031 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 PNMA8CA0A1B0GUJ8 204 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 H3BMH7 237 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 SLC2A10O95528 541 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 ARL4DP49703 201 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 ACSM1Q08AH1 577 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 ZNF181Q2M3W8 571 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 PLK5Q496M5 336 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 ALG10BQ5I7T1 473 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 OR2G6Q5TZ20 316 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 ULK3Q6PHR2 472 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 PLXDC1Q8IUK5 500 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 CPOQ8IVL8 374 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 KLHL36Q8N4N3 616 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 ZNF485Q8NCK3 441 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 BBS1Q8NFJ9 593 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 PTCHD1Q96NR3 888 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 ARHGAP9Q9BRR9 750 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 DUSP15Q9H1R2 295 aaPredicted RBP13.72□□□□□ -0.21
GABPB1-202ENST00000359031 ERVMER34-1Q9H9K5 563 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 MEPEQ9NQ76 525 aaPredicted RBP13.72□□□□□ -0.21
GABPB1-202ENST00000359031 CMC2Q9NRP2 79 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 SEMA5BQ9P283 1151 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 RPS6KB2Q9UBS0 482 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 IL20RAQ9UHF4 553 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 SLC35A3Q9Y2D2 325 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 ISPDA4D126 451 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 SERINC4A6NH21 518 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 C17orf105B2RV13 164 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 DYRK3O43781 588 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 UPK1BO75841 260 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 GLB1P16278 677 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 GABRA5P31644 462 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 GPR143P51810 404 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 OR1D5P58170 312 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 COPZ1P61923 177 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 GPLD1P80108 840 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 IFITM3Q01628 133 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 LINC00114Q6XXX2 140 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 QSOX2Q6ZRP7 698 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 SHFQ7M4L6 423 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 PRSS42Q7Z5A4 293 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 KMT5CQ86Y97 462 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 TM9SF4Q92544 642 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 TRMT61AQ96FX7 289 aaKnown RBP13.72□□□□□ -0.21
GABPB1-202ENST00000359031 IFT27Q9BW83 186 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 HOXD1Q9GZZ0 328 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 SMURF1Q9HCE7 757 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 TXNL4BQ9NX01 149 aaKnown RBP13.72□□□□□ -0.21
GABPB1-202ENST00000359031 TNFRSF10DQ9UBN6 386 aa13.72□□□□□ -0.21
GABPB1-202ENST00000359031 CACNA1AO00555 2505 aa13.71□□□□□ -0.21
GABPB1-202ENST00000359031 DMDP11532 3685 aa13.71□□□□□ -0.21
GABPB1-202ENST00000359031 K7ESF4 209 aa13.71□□□□□ -0.22
GABPB1-202ENST00000359031 WWP2O00308 870 aa13.71□□□□□ -0.22
GABPB1-202ENST00000359031 SOCS6O14544 535 aa13.71□□□□□ -0.22
GABPB1-202ENST00000359031 SLC30A4O14863 429 aa13.71□□□□□ -0.22
GABPB1-202ENST00000359031 POLR1CO15160 346 aaPredicted RBP13.71□□□□□ -0.22
GABPB1-202ENST00000359031 AKAP8O43823 692 aaKnown RBP13.71□□□□□ -0.22
GABPB1-202ENST00000359031 PTP4A3O75365 173 aa13.71□□□□□ -0.22
GABPB1-202ENST00000359031 CSTAP01040 98 aa13.71□□□□□ -0.22
GABPB1-202ENST00000359031 IL1AP01583 271 aa13.71□□□□□ -0.22
GABPB1-202ENST00000359031 DCNP07585 359 aaKnown RBP13.71□□□□□ -0.22
GABPB1-202ENST00000359031 FUT1P19526 365 aa13.71□□□□□ -0.22
GABPB1-202ENST00000359031 PAICSP22234 425 aaKnown RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms