RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 YIF1BQ5BJH7 314 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 MLIPQ5VWP3 458 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 LEG1Q6P5S2 330 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 PLA2G15Q8NCC3 412 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 ZNF384Q8TF68 577 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 C16orf78Q8WTQ4 265 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 MS4A4EQ96PG1 132 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 OPA3Q9H6K4 179 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 AKIP1Q9NQ31 210 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 C2orf42Q9NWW7 574 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 CACNG4Q9UBN1 327 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 PRODH2Q9UF12 536 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 PLAGL1Q9UM63 463 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 POP7O75817 140 aaKnown RBP8.26□□□□□ -1.09
COL6A6-201ENST00000358511 GIPP09681 153 aaPredicted RBP8.26□□□□□ -1.09
COL6A6-201ENST00000358511 PSPHP78330 225 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 SFXN2Q96NB2 322 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 BABAM2Q9NXR7 383 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 SLAMF8Q9P0V8 285 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 A0A0U1RQK1 487 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 FBXO24O75426 580 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 CLN5O75503 358 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 MBP02144 154 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 RING1Q06587 406 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 SLC35G1Q2M3R5 365 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 C22orf39Q6P5X5 142 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 ZC3H14Q6PJT7 736 aaKnown RBP8.26□□□□□ -1.09
COL6A6-201ENST00000358511 ZNF705AQ6ZN79 300 aaPredicted RBP8.26□□□□□ -1.09
COL6A6-201ENST00000358511 KDM8Q8N371 416 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 BACE2Q9Y5Z0 518 aa8.26□□□□□ -1.09
COL6A6-201ENST00000358511 M0R3H8 397 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 DVL2O14641 736 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 ADAM23O75077 832 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 STK17BO94768 372 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 RPS25P62851 125 aaKnown RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 ADARB1P78563 741 aaKnown RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 MAP4K2Q12851 820 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 RAB31Q13636 194 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 SLC6A19Q695T7 634 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 RTL6Q6ICC9 239 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 NIPAL3Q6P499 406 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 CBLL1Q75N03 491 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 MAP6Q96JE9 813 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 TESQ9UGI8 421 aaKnown RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 MDC1Q14676 2089 aaKnown RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 A0A0A6YYJ9 748 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 HOXC11O43248 304 aaPredicted RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 PPP1R3DO95685 299 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 PTPN2P17706 415 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 RAB33AQ14088 237 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 ACTBL2Q562R1 376 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 OR1M1Q8NGA1 313 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 LGALS14Q8TCE9 139 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 WFIKKN2Q8TEU8 576 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 APIPQ96GX9 242 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 PGAP2Q9UHJ9 254 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 FBXO7Q9Y3I1 522 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 PCDHGA5Q9Y5G8 931 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 CCL16O15467 120 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 HTR3BO95264 441 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 HMGCLP35914 325 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 BLKP51451 505 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 SEC61A1P61619 476 aaKnown RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 PLGLAQ15195 96 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 SGCBQ16585 318 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 TTLL10Q6ZVT0 673 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 ZNF695Q8IW36 515 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 OR4F15Q8NGB8 312 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 ALOXE3Q9BYJ1 711 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 SPNS1Q9H2V7 528 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 PURGQ9UJV8 347 aaKnown RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 FBXL2Q9UKC9 423 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 ACTL7AQ9Y615 435 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 EDDM13A0A1B0GTR0 161 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 MEIS3P1A6NDR6 274 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 TSPAN6O43657 245 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 HOXB9P17482 250 aaPredicted RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 MTNR1BP49286 362 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 Q6ZVU0 165 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 SKA3Q8IX90 412 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 CD200R1Q8TD46 325 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 RELTQ969Z4 430 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 ZNF689Q96CS4 500 aaPredicted RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 OR11A1Q9GZK7 315 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 MTHFD2LQ9H903 347 aaPredicted RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 TREX1Q9NSU2 369 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 CSO75390 466 aaKnown RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 HEXBP07686 556 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 CD68P34810 354 aaPredicted RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 SP2Q02086 613 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 TMEM115Q12893 351 aaPredicted RBP8.25□□□□□ -1.09
COL6A6-201ENST00000358511 DUSP7Q16829 419 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 NTMT1Q9BV86 223 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 GAREM1Q9H706 876 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 ZNF281Q9Y2X9 895 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 TRDV1A0A1B0GX56 115 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 SDC1P18827 310 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 LIPAP38571 399 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 HTR3AP46098 478 aa8.25□□□□□ -1.09
COL6A6-201ENST00000358511 TNFRSF17Q02223 184 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms