RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 DIRAS1O95057 198 aa23.06■■□□□ 1.28
SSBP3-202ENST00000357475 ELAVL4P26378 380 aaKnown RBP23.06■■□□□ 1.28
SSBP3-202ENST00000357475 PLGLB1Q02325 96 aa23.06■■□□□ 1.28
SSBP3-202ENST00000357475 ZSWIM7Q19AV6 140 aa23.06■■□□□ 1.28
SSBP3-202ENST00000357475 DEF8Q6ZN54 512 aa23.06■■□□□ 1.28
SSBP3-202ENST00000357475 ZNF550Q7Z398 422 aa23.06■■□□□ 1.28
SSBP3-202ENST00000357475 TMEM251Q8N6I4 163 aa23.06■■□□□ 1.28
SSBP3-202ENST00000357475 TOR1AIP2Q8NFQ8 470 aa23.06■■□□□ 1.28
SSBP3-202ENST00000357475 C1GALT1C1Q96EU7 318 aa23.06■■□□□ 1.28
SSBP3-202ENST00000357475 MED12Q93074 2177 aa23.05■■□□□ 1.28
SSBP3-202ENST00000357475 PRRC2CQ9Y520 2896 aaKnown RBP23.05■■□□□ 1.28
SSBP3-202ENST00000357475 WISP2O76076 250 aa23.05■■□□□ 1.28
SSBP3-202ENST00000357475 LINGO3P0C6S8 592 aa23.05■■□□□ 1.28
SSBP3-202ENST00000357475 MSX1P28360 303 aa23.05■■□□□ 1.28
SSBP3-202ENST00000357475 MAGEA5P43359 124 aa23.05■■□□□ 1.28
SSBP3-202ENST00000357475 IDH2P48735 452 aaKnown RBP23.05■■□□□ 1.28
SSBP3-202ENST00000357475 QPRTQ15274 297 aa23.05■■□□□ 1.28
SSBP3-202ENST00000357475 OR5M1Q8NGP8 315 aa23.05■■□□□ 1.28
SSBP3-202ENST00000357475 PHF10Q8WUB8 498 aaKnown RBP23.05■■□□□ 1.28
SSBP3-202ENST00000357475 PNPLA2Q96AD5 504 aa23.05■■□□□ 1.28
SSBP3-202ENST00000357475 MCHR1Q99705 422 aa23.05■■□□□ 1.28
SSBP3-202ENST00000357475 MED17Q9NVC6 651 aa23.05■■□□□ 1.28
SSBP3-202ENST00000357475 NDUFAF4Q9P032 175 aa23.05■■□□□ 1.28
SSBP3-202ENST00000357475 CPSF4LA6NMK7 179 aaKnown RBP23.04■■□□□ 1.28
SSBP3-202ENST00000357475 CBR3O75828 277 aa23.04■■□□□ 1.28
SSBP3-202ENST00000357475 RASAL1O95294 804 aa23.04■■□□□ 1.28
SSBP3-202ENST00000357475 IFNW1P05000 195 aa23.04■■□□□ 1.28
SSBP3-202ENST00000357475 GDF1P27539 372 aa23.04■■□□□ 1.28
SSBP3-202ENST00000357475 SUMO3P55854 103 aaPredicted RBP23.04■■□□□ 1.28
SSBP3-202ENST00000357475 PPIAP62937 165 aaKnown RBP23.04■■□□□ 1.28
SSBP3-202ENST00000357475 KCNC4Q03721 635 aa23.04■■□□□ 1.28
SSBP3-202ENST00000357475 CBFBQ13951 182 aa23.04■■□□□ 1.28
SSBP3-202ENST00000357475 ZNF440Q8IYI8 595 aa23.04■■□□□ 1.28
SSBP3-202ENST00000357475 CADM2Q8N3J6 435 aa23.04■■□□□ 1.28
SSBP3-202ENST00000357475 SLC35B4Q969S0 331 aa23.04■■□□□ 1.28
SSBP3-202ENST00000357475 UGT2B28Q9BY64 529 aa23.04■■□□□ 1.28
SSBP3-202ENST00000357475 DPP4P27487 766 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 TOMM20Q15388 145 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 PLPPR5Q32ZL2 321 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 ENTPD8Q5MY95 495 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 PYDC1Q8WXC3 89 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 TSPAN10Q9H1Z9 355 aaPredicted RBP23.03■■□□□ 1.28
SSBP3-202ENST00000357475 MAGIXQ9H6Y5 334 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 IL1RAPQ9NPH3 570 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 TESQ9UGI8 421 aaKnown RBP23.03■■□□□ 1.28
SSBP3-202ENST00000357475 FFAR1O14842 300 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 ZIC3O60481 467 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 NTN1O95631 604 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 THY1P04216 161 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 GPIP06744 558 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 PSMA4P25789 261 aaKnown RBP23.03■■□□□ 1.28
SSBP3-202ENST00000357475 SLC6A8P48029 635 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 SESN3P58005 492 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 CHRNB3Q05901 458 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 PIN1Q13526 163 aaPredicted RBP23.03■■□□□ 1.28
SSBP3-202ENST00000357475 HYAL4Q2M3T9 481 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 FAM98BQ52LJ0 330 aaKnown RBP23.03■■□□□ 1.28
SSBP3-202ENST00000357475 YRDCQ86U90 279 aaKnown RBP23.03■■□□□ 1.28
SSBP3-202ENST00000357475 ZDHHC21Q8IVQ6 265 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 ZNF563Q8TA94 476 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 CHID1Q9BWS9 393 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 PTGES2Q9H7Z7 377 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 CCM2LQ9NUG4 571 aaPredicted RBP23.03■■□□□ 1.28
SSBP3-202ENST00000357475 RHCGQ9UBD6 479 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 RPH3AQ9Y2J0 694 aaPredicted RBP23.03■■□□□ 1.28
SSBP3-202ENST00000357475 ENPP4Q9Y6X5 453 aa23.03■■□□□ 1.28
SSBP3-202ENST00000357475 TRAPPC6AO75865 159 aa23.02■■□□□ 1.28
SSBP3-202ENST00000357475 UMPSP11172 480 aa23.02■■□□□ 1.28
SSBP3-202ENST00000357475 PRKCAP17252 672 aa23.02■■□□□ 1.28
SSBP3-202ENST00000357475 PGCP20142 388 aa23.02■■□□□ 1.28
SSBP3-202ENST00000357475 DSCR4P56555 118 aaPredicted RBP23.02■■□□□ 1.28
SSBP3-202ENST00000357475 FOXF1Q12946 379 aa23.02■■□□□ 1.28
SSBP3-202ENST00000357475 FOXD4Q12950 439 aaPredicted RBP23.02■■□□□ 1.28
SSBP3-202ENST00000357475 OR1Q1Q15612 314 aa23.02■■□□□ 1.28
SSBP3-202ENST00000357475 RANBP3LQ86VV4 465 aaPredicted RBP23.02■■□□□ 1.28
SSBP3-202ENST00000357475 TEX19Q8NA77 164 aa23.02■■□□□ 1.28
SSBP3-202ENST00000357475 FAM98AQ8NCA5 519 aaKnown RBP23.02■■□□□ 1.28
SSBP3-202ENST00000357475 FAM83FQ8NEG4 500 aaPredicted RBP23.02■■□□□ 1.28
SSBP3-202ENST00000357475 POC1BQ8TC44 478 aa23.02■■□□□ 1.28
SSBP3-202ENST00000357475 ZNF300Q96RE9 604 aaPredicted RBP23.02■■□□□ 1.28
SSBP3-202ENST00000357475 UBL7Q96S82 380 aaPredicted RBP23.02■■□□□ 1.28
SSBP3-202ENST00000357475 ZNF559Q9BR84 538 aa23.02■■□□□ 1.28
SSBP3-202ENST00000357475 TAS2R10Q9NYW0 307 aa23.02■■□□□ 1.28
SSBP3-202ENST00000357475 DKKL1Q9UK85 242 aa23.02■■□□□ 1.28
SSBP3-202ENST00000357475 A4GNTQ9UNA3 340 aa23.02■■□□□ 1.28
SSBP3-202ENST00000357475 IGSF10Q6WRI0 2623 aa23.01■■□□□ 1.27
SSBP3-202ENST00000357475 FKBP6O75344 327 aa23.01■■□□□ 1.27
SSBP3-202ENST00000357475 PRSS23O95084 383 aa23.01■■□□□ 1.27
SSBP3-202ENST00000357475 FABP3P05413 133 aa23.01■■□□□ 1.27
SSBP3-202ENST00000357475 RAP2AP10114 183 aa23.01■■□□□ 1.27
SSBP3-202ENST00000357475 HK1P19367 917 aa23.01■■□□□ 1.27
SSBP3-202ENST00000357475 MAGEA2P43356 314 aa23.01■■□□□ 1.27
SSBP3-202ENST00000357475 GANABQ14697 944 aaKnown RBP23.01■■□□□ 1.27
SSBP3-202ENST00000357475 RPUSD3Q6P087 351 aaKnown RBP23.01■■□□□ 1.27
SSBP3-202ENST00000357475 ADAMTS16Q8TE57 1224 aa23.01■■□□□ 1.27
SSBP3-202ENST00000357475 DEFB127Q9H1M4 99 aa23.01■■□□□ 1.27
SSBP3-202ENST00000357475 LIPGQ9Y5X9 500 aa23.01■■□□□ 1.27
SSBP3-202ENST00000357475 A0A1B0GWA3 101 aa23■■□□□ 1.27
SSBP3-202ENST00000357475 FAAHO00519 579 aa23■■□□□ 1.27
SSBP3-202ENST00000357475 LYPD3O95274 346 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms