RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 KLK4Q9Y5K2 254 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 PREX1Q8TCU6 1659 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 H7C1Q1 480 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 ANGPTL7O43827 346 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 S100A11P31949 105 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 CLDN6P56747 220 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 MS4A2Q01362 244 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 BAK1Q16611 211 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 MPEG1Q2M385 716 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 FAM111BQ6SJ93 734 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 APOOLQ6UXV4 268 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 MEX3BQ6ZN04 569 aaKnown RBP12.1□□□□□ -0.47
SMC4-202ENST00000357388 C1orf87Q8N0U7 546 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 UMODL1-AS1Q8N2C9 162 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 ASB17Q8WXJ9 295 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 CMSS1Q9BQ75 279 aaKnown RBP12.1□□□□□ -0.47
SMC4-202ENST00000357388 TUBB1Q9H4B7 451 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 TAS2R16Q9NYV7 291 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 IL20RAQ9UHF4 553 aa12.1□□□□□ -0.47
SMC4-202ENST00000357388 ELK1P19419 428 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 OTX2P32243 289 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 ECI1P42126 302 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 LANCL3Q6ZV70 420 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 SERINC5Q86VE9 423 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 SLC35F3Q8IY50 421 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 BPIFB2Q8N4F0 458 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 OR52H1Q8NGJ2 320 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 MS4A4EQ96PG1 132 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 SMOQ99835 787 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 SMIM3Q9BZL3 60 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 MCOLN1Q9GZU1 580 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 NIT2Q9NQR4 276 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 GPR160Q9UJ42 338 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 RIMS3Q9UJD0 308 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 A0A1B0GVG6 124 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 ZNF860A6NHJ4 632 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 HLA-DOBP13765 273 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 GABRA5P31644 462 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 HBG1P69891 147 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 HBG2P69892 147 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 ZNF266Q14584 549 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 RNF151Q2KHN1 245 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 LCN10Q6JVE6 187 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 EID2Q8N6I1 236 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 OR10R2Q8NGX6 335 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 DIO2Q92813 273 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 MYADMQ96S97 322 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 CDCA3Q99618 268 aaPredicted RBP12.09□□□□□ -0.47
SMC4-202ENST00000357388 EXO1Q9UQ84 846 aaKnown RBP12.09□□□□□ -0.47
SMC4-202ENST00000357388 PTNP21246 168 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 LAP3P28838 519 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 SSTR4P31391 388 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 HNF1BP35680 557 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 LTBQ06643 244 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 TTLL10Q6ZVT0 673 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 GPR155Q7Z3F1 870 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 ENTHD1Q8IYW4 607 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 OR4K15Q8NH41 348 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 RNF170Q96K19 258 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 CA14Q9ULX7 337 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 HHLA2Q9UM44 414 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 WIF1Q9Y5W5 379 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 KIF1AQ12756 1690 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 COCHO43405 550 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 MT-ND4LP03901 98 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 BMP1P13497 986 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 TNFSF4P23510 183 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 MSX1P28360 303 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 DBPQ10586 325 aaPredicted RBP12.09□□□□□ -0.47
SMC4-202ENST00000357388 GPR176Q14439 515 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 NFATC4Q14934 902 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 RAB35Q15286 201 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 PDLIM3Q53GG5 364 aaPredicted RBP12.09□□□□□ -0.47
SMC4-202ENST00000357388 LPCAT3Q6P1A2 487 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 RPL22L1Q6P5R6 122 aaKnown RBP12.09□□□□□ -0.47
SMC4-202ENST00000357388 DPPA2Q7Z7J5 298 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 TRAPPC6BQ86SZ2 158 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 HUS1BQ8NHY5 278 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 SDSLQ96GA7 329 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 MED17Q9NVC6 651 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 HAO2Q9NYQ3 351 aa12.09□□□□□ -0.47
SMC4-202ENST00000357388 HIDE1A8MVS5 230 aa12.08□□□□□ -0.47
SMC4-202ENST00000357388 B4DXG7 233 aa12.08□□□□□ -0.47
SMC4-202ENST00000357388 PNPP00491 289 aa12.08□□□□□ -0.47
SMC4-202ENST00000357388 EFNA3P52797 238 aa12.08□□□□□ -0.47
SMC4-202ENST00000357388 BTG1P62324 171 aa12.08□□□□□ -0.47
SMC4-202ENST00000357388 RUNX3Q13761 415 aa12.08□□□□□ -0.47
SMC4-202ENST00000357388 FAM69BQ5VUD6 431 aa12.08□□□□□ -0.47
SMC4-202ENST00000357388 MEPCEQ7L2J0 689 aaKnown RBP12.08□□□□□ -0.47
SMC4-202ENST00000357388 OSTM1Q86WC4 334 aa12.08□□□□□ -0.47
SMC4-202ENST00000357388 GATSQ8NAP1 163 aa12.08□□□□□ -0.47
SMC4-202ENST00000357388 OR9Q2Q8NGE9 314 aa12.08□□□□□ -0.47
SMC4-202ENST00000357388 MAP3K3Q99759 626 aa12.08□□□□□ -0.47
SMC4-202ENST00000357388 TXLNGYQ9BZA5 131 aa12.08□□□□□ -0.47
SMC4-202ENST00000357388 SMG9Q9H0W8 520 aaKnown RBP12.08□□□□□ -0.47
SMC4-202ENST00000357388 HIPK2Q9H2X6 1198 aa12.08□□□□□ -0.47
SMC4-202ENST00000357388 RCE1Q9Y256 329 aa12.08□□□□□ -0.47
SMC4-202ENST00000357388 ADAMTS4O75173 837 aa12.08□□□□□ -0.48
SMC4-202ENST00000357388 MEF2AQ02078 507 aaPredicted RBP12.08□□□□□ -0.48
SMC4-202ENST00000357388 TLE1Q04724 770 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms