RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 RUNX3Q13761 415 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 DUSP5Q16690 384 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 TRMT12Q53H54 448 aaKnown RBP6.36□□□□□ -1.39
RTN4-203ENST00000357376 TMEM31Q5JXX7 168 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 ZNF620Q6ZNG0 422 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 OR6N2Q8NGY6 317 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 OR4Q3Q8NH05 313 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 PHOSPHO1Q8TCT1 267 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 GIMAP1Q8WWP7 306 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 SLC35A4Q96G79 324 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 COMMD4Q9H0A8 199 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 FN3KQ9H479 309 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 CDCP1Q9H5V8 836 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 C11orf49Q9H6J7 331 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 KCMF1Q9P0J7 381 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 UBQLN2Q9UHD9 624 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 RCE1Q9Y256 329 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 MAB21L2Q9Y586 359 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 ATG2BQ96BY7 2078 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 PCP4L1A6NKN8 68 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 CLDN4O14493 209 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 NRG2O14511 850 aaPredicted RBP6.36□□□□□ -1.39
RTN4-203ENST00000357376 RAD1O60671 282 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 ICMTO60725 284 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 SLC43A1O75387 559 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 GATBO75879 557 aaKnown RBP6.36□□□□□ -1.39
RTN4-203ENST00000357376 HNRNPA1P09651 372 aaKnown RBP eCLIP6.36□□□□□ -1.393e-6■□□□□ 10.5
RTN4-203ENST00000357376 CLUP10909 449 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 PRKCAP17252 672 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 TRHRP34981 398 aaPredicted RBP6.36□□□□□ -1.39
RTN4-203ENST00000357376 OR3A3P47888 321 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 GZMKP49863 264 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 EEF1A2Q05639 463 aaKnown RBP6.36□□□□□ -1.39
RTN4-203ENST00000357376 MESP2Q0VG99 397 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 SNTA1Q13424 505 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 C1orf61Q13536 156 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 EFR3AQ14156 821 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 AGERQ15109 404 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 FAM78AQ5JUQ0 283 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 LIN54Q6MZP7 749 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 FIGLAQ6QHK4 219 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 COMMD7Q86VX2 200 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 KIF18BQ86Y91 864 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 SIAH3Q8IW03 269 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 ZNF619Q8N2I2 560 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 ARL14Q8N4G2 192 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 SIRT6Q8N6T7 355 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 MOSPD2Q8NHP6 518 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 ABHD4Q8TB40 342 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 HCAR2Q8TDS4 363 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 FCAMRQ8WWV6 532 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 FGF13Q92913 245 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 KIAA1143Q96AT1 154 aaPredicted RBP6.36□□□□□ -1.39
RTN4-203ENST00000357376 TNFRSF13CQ96RJ3 184 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 SLC38A1Q9H2H9 487 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 PIGUQ9H490 435 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 Q9N2J8 555 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 COMMD9Q9P000 198 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 KLHL21Q9UJP4 597 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 KCND3Q9UK17 655 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 POLHQ9Y253 713 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 PRELID1Q9Y255 219 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 B4DGG1 531 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 TEX46H3BTG2 121 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 KHNYNO15037 678 aaKnown RBP6.36□□□□□ -1.39
RTN4-203ENST00000357376 ARPC1BO15143 372 aaKnown RBP6.36□□□□□ -1.39
RTN4-203ENST00000357376 ZNF780AO75290 641 aaPredicted RBP6.36□□□□□ -1.39
RTN4-203ENST00000357376 SOD1P00441 154 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 C1QBP02746 253 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 EIF4EP06730 217 aaKnown RBP6.36□□□□□ -1.39
RTN4-203ENST00000357376 SYPP08247 313 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 TRAPPC2P0DI81 140 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 TRAPPC2BP0DI82 140 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 F3P13726 295 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 GPLD1P80108 840 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 FOXK2Q01167 660 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 GAS6Q14393 721 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 RPE65Q16518 533 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 DECR1Q16698 335 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 MFSD12Q6NUT3 480 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 KIAA1211LQ6NV74 962 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 ARHGAP11AQ6P4F7 1023 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 METAP1DQ6UB28 335 aaPredicted RBP6.36□□□□□ -1.39
RTN4-203ENST00000357376 ZNF836Q6ZNA1 936 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 ZNF627Q7L945 461 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 LINC01555Q8NAE3 123 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 OR7G2Q8NG99 324 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 OR2A1Q8NGT9 310 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 ZFAND1Q8TCF1 268 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 DNAJA4Q8WW22 397 aaPredicted RBP6.36□□□□□ -1.39
RTN4-203ENST00000357376 GCDHQ92947 438 aaPredicted RBP6.36□□□□□ -1.39
RTN4-203ENST00000357376 PMEPA1Q969W9 287 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 ORAI1Q96D31 301 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 ELMOD3Q96FG2 381 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 SPACA7Q96KW9 195 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 OR14A2Q96R54 314 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 ATF6BQ99941 703 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 PDCD1LG2Q9BQ51 273 aa6.36□□□□□ -1.39
RTN4-203ENST00000357376 GTPBP2Q9BX10 602 aaKnown RBP6.36□□□□□ -1.39
RTN4-203ENST00000357376 TAPBPLQ9BX59 468 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms