RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 TSPAN5P62079 268 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 TGM3Q08188 693 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 FAM46CQ5VWP2 391 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 RPTNQ6XPR3 784 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 IZUMO1Q8IYV9 350 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 SIRT6Q8N6T7 355 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 FBXO15Q8NCQ5 510 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 OR4Q3Q8NH05 313 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 PIGXQ8TBF5 258 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 SCMH1Q96GD3 660 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 NARS2Q96I59 477 aaKnown RBP7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 SAMD8Q96LT4 415 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 SPATA5L1Q9BVQ7 753 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 BTBD1Q9H0C5 482 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 EVA1AQ9H8M9 152 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 CXXC1Q9P0U4 656 aaPredicted RBP7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 ENTPD4Q9Y227 616 aa7.68□□□□□ -1.18
CDC42SE1-201ENST00000357235 TEX13CA0A0J9YWL9 993 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 DAPL1A0PJW8 107 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 IRGMA1A4Y4 181 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 SGK494L7N484 410 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 KIAA0355O15063 1070 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 ERI3O43414 337 aaKnown RBP7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 LCMT2O60294 686 aaKnown RBP7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 S100A8P05109 93 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 RNF224P0DH78 156 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 PVALBP20472 110 aaPredicted RBP7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 ACSL1P33121 698 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 TRHRP34981 398 aaPredicted RBP7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 MMP12P39900 470 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 ARFIP1P53367 373 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 GAS1P54826 345 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 ST8SIA6P61647 398 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 SREBF2Q12772 1141 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 TEAD2Q15562 447 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZNF528Q3MIS6 628 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 METAP1DQ6UB28 335 aaPredicted RBP7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 LYPD4Q6UWN0 246 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 TMEM91Q6ZNR0 172 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 TOMM5Q8N4H5 51 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 TMEM255BQ8WV15 326 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 RGMAQ96B86 450 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 NUS1Q96E22 293 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZDHHC12Q96GR4 267 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 AMDHD1Q96NU7 426 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 OR2M2Q96R28 347 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 ABHD1Q96SE0 405 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 MS4A8Q9BY19 250 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZDHHC5Q9C0B5 715 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 CAPN10Q9HC96 672 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 DLL4Q9NR61 685 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 POLE3Q9NRF9 147 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 SLC22A11Q9NSA0 550 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 WBP1LQ9NX94 342 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 GPR160Q9UJ42 338 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 CHST2Q9Y4C5 530 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 HCFC2Q9Y5Z7 792 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 SIRT4Q9Y6E7 314 aaPredicted RBP7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 TMEM82A0PJX8 343 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 D6RAR5 112 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 J3QLW9 94 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 FCMRO60667 390 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 EFCAB14O75071 495 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 GYPBP06028 91 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 ATXN8OSP0DMR3 200 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 TFPIP10646 304 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 SFTPCP11686 197 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZNF19P17023 458 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 TBXA2RP21731 343 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 KCNJ3P48549 501 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 PITPNBP48739 271 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 KHKP50053 298 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 CCR8P51685 355 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 PCBP4P57723 403 aaKnown RBP7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 SLC7A9P82251 487 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZNF155Q12901 538 aaPredicted RBP7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 KRT33BQ14525 404 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 TRAM2Q15035 370 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 HAGHLQ6PII5 290 aaPredicted RBP7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZNF322Q6U7Q0 402 aaPredicted RBP7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 ALKAL2Q6UX46 152 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 CEACAM19Q7Z692 300 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 FAM129CQ86XR2 697 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 UXS1Q8NBZ7 420 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 GNPDA2Q8TDQ7 276 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 C2CD4CQ8TF44 421 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 ING5Q8WYH8 240 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 CMSS1Q9BQ75 279 aaKnown RBP7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 KLHL31Q9H511 634 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 GAREM1Q9H706 876 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 FGF20Q9NP95 211 aaPredicted RBP7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 HINT3Q9NQE9 182 aaKnown RBP7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 PRMT8Q9NR22 394 aaPredicted RBP7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 SPHK2Q9NRA0 654 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZNF275Q9NSD4 429 aaPredicted RBP7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 SLC23A2Q9UGH3 650 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 PLXNB3Q9ULL4 1909 aa7.67□□□□□ -1.18
CDC42SE1-201ENST00000357235 MEIKINA0A087WXM9 373 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 EFCAB7A8K855 629 aa7.66□□□□□ -1.18
CDC42SE1-201ENST00000357235 GPR171O14626 319 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms