RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 ZNF44P15621 663 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 AHRP35869 848 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 AQP2P41181 271 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 P2RY14Q15391 338 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 OR1Q1Q15612 314 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 GRAMD2AQ8IUY3 354 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 POC1BQ8TC44 478 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 ADAMTS16Q8TE57 1224 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 IL1F10Q8WWZ1 152 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 CARD8Q9Y2G2 431 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 MRPL33O75394 65 aaKnown RBP16.89■□□□□ 0.29
COL18A1-202ENST00000355480 PLAG1Q6DJT9 500 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 PTCRAQ6ISU1 281 aaPredicted RBP16.89■□□□□ 0.29
COL18A1-202ENST00000355480 MEX3BQ6ZN04 569 aaKnown RBP16.89■□□□□ 0.29
COL18A1-202ENST00000355480 FAM83FQ8NEG4 500 aaPredicted RBP16.89■□□□□ 0.29
COL18A1-202ENST00000355480 OR4K15Q8NH41 348 aa16.89■□□□□ 0.29
COL18A1-202ENST00000355480 NR4A2P43354 598 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 PCBD1P61457 104 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 C19orf47Q8N9M1 422 aaKnown RBP16.88■□□□□ 0.29
COL18A1-202ENST00000355480 MFSD9Q8NBP5 474 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 MUCL1Q96DR8 90 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 ICAM2P13598 275 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 CHRNB4P30926 498 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 FAM174AQ8TBP5 190 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 TBCCD1Q9NVR7 557 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 ARFGEF2Q9Y6D5 1785 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 KDM4EB2RXH2 506 aaPredicted RBP16.88■□□□□ 0.29
COL18A1-202ENST00000355480 DVL2O14641 736 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 SC5DO75845 299 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 ANKRD13BQ86YJ7 626 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 GDPD1Q8N9F7 314 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 CNOT9Q92600 299 aaKnown RBP16.88■□□□□ 0.29
COL18A1-202ENST00000355480 ZNF681Q96N22 645 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 TMEM100Q9NV29 134 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 PPP6CO00743 305 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 SORBS2O94875 1100 aaKnown RBP16.88■□□□□ 0.29
COL18A1-202ENST00000355480 LUMP51884 338 aaPredicted RBP16.88■□□□□ 0.29
COL18A1-202ENST00000355480 KCTD20Q7Z5Y7 419 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.88■□□□□ 0.291e-6■■■□□ 17.7
COL18A1-202ENST00000355480 OR2A12Q8NGT7 310 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 EDAQ92838 391 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 S100PBPQ96BU1 408 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 COG8Q96MW5 612 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 SORT1Q99523 831 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 DCNP07585 359 aaKnown RBP16.88■□□□□ 0.29
COL18A1-202ENST00000355480 EN2P19622 333 aaPredicted RBP16.88■□□□□ 0.29
COL18A1-202ENST00000355480 HSD17B7P56937 341 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 MOB3CQ70IA8 216 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 KIAA0907Q7Z7F0 614 aaPredicted RBP16.88■□□□□ 0.29
COL18A1-202ENST00000355480 OR14A16Q8NHC5 309 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 BIRC8Q96P09 236 aa16.88■□□□□ 0.29
COL18A1-202ENST00000355480 SETD1AO15047 1707 aaKnown RBP16.87■□□□□ 0.29
COL18A1-202ENST00000355480 MYH11P35749 1972 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 C2orf72A6NCS6 295 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 TRIM64CA6NLI5 447 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 ZNF736B4DX44 427 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-202ENST00000355480 AIFM1O95831 613 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 EGFP01133 1207 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 NFATC3Q12968 1075 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 SLC22A6Q4U2R8 563 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 VASNQ6EMK4 673 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 PODNL1Q6PEZ8 512 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 LMNTD1Q8N9Z9 388 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 SYNPRQ8TBG9 265 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 SNAPC3Q92966 411 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 ARRDC3Q96B67 414 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 VRK1Q99986 396 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-202ENST00000355480 PPIL3Q9H2H8 161 aaKnown RBP16.87■□□□□ 0.29
COL18A1-202ENST00000355480 SYPL1Q16563 259 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 HYAL4Q2M3T9 481 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 ACSM3Q53FZ2 586 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 ZNF322Q6U7Q0 402 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-202ENST00000355480 B3GNT9Q6UX72 402 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 MKXQ8IYA7 352 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 ZNF595Q8IYB9 648 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 B3GNT7Q8NFL0 401 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 PPP1R14DQ9NXH3 145 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 LYRM1O43325 122 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 SLC22A5O76082 557 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 INHBCP55103 352 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 CAV3P56539 151 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 KCNJ10P78508 379 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 TECPR1Q7Z6L1 1165 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 PIGCQ92535 297 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 C4orf36Q96KX1 117 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 ZNF576Q9H609 170 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 HHLA2Q9UM44 414 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 MEIS3P1A6NDR6 274 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 GLSO94925 669 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-202ENST00000355480 APOC3P02656 99 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 CYCSP99999 105 aaKnown RBP16.87■□□□□ 0.29
COL18A1-202ENST00000355480 CNIH2Q6PI25 160 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 GPR149Q86SP6 731 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 PRSS16Q9NQE7 514 aa16.87■□□□□ 0.29
COL18A1-202ENST00000355480 CD300LBA8K4G0 201 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 IGHEP01854 428 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 CSF1P09603 554 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 PPP5CP53041 499 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 RAB38P57729 211 aa16.86■□□□□ 0.29
COL18A1-202ENST00000355480 RAB40BQ12829 278 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms