RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 ART5Q96L15 291 aa10.6□□□□□ -0.71
CAPN9-202ENST00000354537 MS4A4EQ96PG1 132 aa10.6□□□□□ -0.71
CAPN9-202ENST00000354537 MRI1Q9BV20 369 aa10.6□□□□□ -0.71
CAPN9-202ENST00000354537 IFT27Q9BW83 186 aa10.6□□□□□ -0.71
CAPN9-202ENST00000354537 SPRTNQ9H040 489 aaPredicted RBP10.6□□□□□ -0.71
CAPN9-202ENST00000354537 C20orf85Q9H1P6 137 aa10.6□□□□□ -0.71
CAPN9-202ENST00000354537 ADGRL4Q9HBW9 690 aa10.6□□□□□ -0.71
CAPN9-202ENST00000354537 PRDM9Q9NQV7 894 aa10.6□□□□□ -0.71
CAPN9-202ENST00000354537 ZNF224Q9NZL3 707 aa10.6□□□□□ -0.71
CAPN9-202ENST00000354537 RPS6KB2Q9UBS0 482 aa10.6□□□□□ -0.71
CAPN9-202ENST00000354537 GLS2Q9UI32 602 aa10.6□□□□□ -0.71
CAPN9-202ENST00000354537 ST6GALNAC2Q9UJ37 374 aa10.6□□□□□ -0.71
CAPN9-202ENST00000354537 CKAP5Q14008 2032 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 TBC1D3EA0A087X179 549 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 A0A0G2JN53 185 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 GLOD5A6NK44 160 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 G3V3Q6 166 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 PPM1DO15297 605 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 ERI3O43414 337 aaKnown RBP10.59□□□□□ -0.71
CAPN9-202ENST00000354537 FCMRO60667 390 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 NTN1O95631 604 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 ADH1AP07327 375 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 ATF1P18846 271 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 PSMB1P20618 241 aaKnown RBP10.59□□□□□ -0.71
CAPN9-202ENST00000354537 NT5EP21589 574 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 ZP3P21754 424 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 BCL6P41182 706 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 MECP2P51608 486 aaKnown RBP10.59□□□□□ -0.71
CAPN9-202ENST00000354537 GBX2P52951 348 aaPredicted RBP10.59□□□□□ -0.71
CAPN9-202ENST00000354537 ZP1P60852 638 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 MRPS10P82664 201 aaKnown RBP10.59□□□□□ -0.71
CAPN9-202ENST00000354537 TEAD2Q15562 447 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 MFSD12Q6NUT3 480 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 FAM122CQ6P4D5 195 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 ZNF836Q6ZNA1 936 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 KCTD20Q7Z5Y7 419 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 DEFB128Q7Z7B8 93 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 GALNT11Q8NCW6 608 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 OR2T35Q8NGX2 323 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 C15orf40Q8WUR7 153 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 TMEM239Q8WW34 195 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 SMPDL3BQ92485 455 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 GHSRQ92847 366 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 RAB7BQ96AH8 199 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 C4orf36Q96KX1 117 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 UTP23Q9BRU9 249 aaKnown RBP10.59□□□□□ -0.71
CAPN9-202ENST00000354537 EVA1BQ9NVM1 165 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 FBXL21Q9UKT6 434 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 PCDHGA9Q9Y5G4 932 aaKnown RBP10.59□□□□□ -0.71
CAPN9-202ENST00000354537 PCYT1BQ9Y5K3 369 aaPredicted RBP10.59□□□□□ -0.71
CAPN9-202ENST00000354537 RIIAD1A6NNX1 92 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 J3QLW9 94 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 PRKRAO75569 313 aaKnown RBP10.59□□□□□ -0.71
CAPN9-202ENST00000354537 REM1O75628 298 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 LYPD3O95274 346 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 GIPP09681 153 aaPredicted RBP10.59□□□□□ -0.71
CAPN9-202ENST00000354537 ANKRD34CP0C6C1 535 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 ZNF19P17023 458 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 SOX9P48436 509 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 CCR6P51684 374 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 BLVRAP53004 296 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 OPCMLQ14982 345 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 HNRNPA1L2Q32P51 320 aaKnown RBP10.59□□□□□ -0.71
CAPN9-202ENST00000354537 NHLRC3Q5JS37 347 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 FAM27D1Q5T7N8 215 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 UNQ9370/PRO34162Q6UXP9 181 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 NUDT18Q6ZVK8 323 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 FTMTQ8N4E7 242 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 OR6C4Q8NGE1 309 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 OR9A2Q8NGT5 310 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 NACC2Q96BF6 587 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 ZFP3Q96NJ6 502 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 WDR26Q9H7D7 661 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 NTNG1Q9Y2I2 539 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 WDR45Q9Y484 360 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 DNAH12Q6ZR08 3092 aa10.59□□□□□ -0.71
CAPN9-202ENST00000354537 SCN5AQ14524 2016 aa10.58□□□□□ -0.72
CAPN9-202ENST00000354537 A0A1B0GVC2 190 aa10.58□□□□□ -0.72
CAPN9-202ENST00000354537 hCG_1807616A0A1W2PRN6 198 aa10.58□□□□□ -0.72
CAPN9-202ENST00000354537 CIB4A0PJX0 185 aa10.58□□□□□ -0.72
CAPN9-202ENST00000354537 CDHR4A6H8M9 788 aa10.58□□□□□ -0.72
CAPN9-202ENST00000354537 A6NIN4 97 aa10.58□□□□□ -0.72
CAPN9-202ENST00000354537 PDCD5O14737 125 aa10.58□□□□□ -0.72
CAPN9-202ENST00000354537 CCL16O15467 120 aa10.58□□□□□ -0.72
CAPN9-202ENST00000354537 WNT1P04628 370 aa10.58□□□□□ -0.72
CAPN9-202ENST00000354537 INHAP05111 366 aa10.58□□□□□ -0.72
CAPN9-202ENST00000354537 IL5P05113 134 aa10.58□□□□□ -0.72
CAPN9-202ENST00000354537 DBIP07108 87 aaKnown RBP10.58□□□□□ -0.72
CAPN9-202ENST00000354537 HOXD4P09016 255 aaPredicted RBP10.58□□□□□ -0.72
CAPN9-202ENST00000354537 MAKP20794 623 aa10.58□□□□□ -0.72
CAPN9-202ENST00000354537 RPS4Y1P22090 263 aaKnown RBP10.58□□□□□ -0.72
CAPN9-202ENST00000354537 CALCRP30988 508 aa10.58□□□□□ -0.72
CAPN9-202ENST00000354537 GDNFP39905 211 aa10.58□□□□□ -0.72
CAPN9-202ENST00000354537 ACTA2P62736 377 aa10.58□□□□□ -0.72
CAPN9-202ENST00000354537 ACTG2P63267 376 aa10.58□□□□□ -0.72
CAPN9-202ENST00000354537 ILF3Q12906 894 aaKnown RBP eCLIP10.58□□□□□ -0.72
CAPN9-202ENST00000354537 ELAVL3Q14576 367 aaKnown RBP10.58□□□□□ -0.72
CAPN9-202ENST00000354537 ZNF267Q14586 743 aaPredicted RBP10.58□□□□□ -0.72
CAPN9-202ENST00000354537 SUZ12Q15022 739 aaKnown RBP10.58□□□□□ -0.72
CAPN9-202ENST00000354537 ZNF750Q32MQ0 723 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms