RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 TP53P04637 393 aaPredicted RBP18.8■□□□□ 0.6
TRIM4-202ENST00000354241 ATP6V1B1P15313 513 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 CDK5R2Q13319 367 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 KCTD21Q4G0X4 260 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 C6orf141Q5SZD1 244 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 RNF113BQ8IZP6 322 aaKnown RBP18.8■□□□□ 0.6
TRIM4-202ENST00000354241 TSPAN14Q8NG11 270 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 TMCO6Q96DC7 493 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 DSN1Q9H410 356 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 BATF3Q9NR55 127 aa18.8■□□□□ 0.6
TRIM4-202ENST00000354241 C21orf140B9A014 251 aa18.79■□□□□ 0.6
TRIM4-202ENST00000354241 PROB1E7EW31 1015 aa18.79■□□□□ 0.6
TRIM4-202ENST00000354241 STMND1H3BQB6 276 aa18.79■□□□□ 0.6
TRIM4-202ENST00000354241 MASP2O00187 686 aa18.79■□□□□ 0.6
TRIM4-202ENST00000354241 NAGAP17050 411 aa18.79■□□□□ 0.6
TRIM4-202ENST00000354241 F8A1P23610 371 aa18.79■□□□□ 0.6
TRIM4-202ENST00000354241 TMED10P49755 219 aaKnown RBP18.79■□□□□ 0.6
TRIM4-202ENST00000354241 CDH15P55291 814 aa18.79■□□□□ 0.6
TRIM4-202ENST00000354241 MAD2L1BPQ15013 274 aaPredicted RBP18.79■□□□□ 0.6
TRIM4-202ENST00000354241 ENTHD1Q8IYW4 607 aa18.79■□□□□ 0.6
TRIM4-202ENST00000354241 FBLIM1Q8WUP2 373 aa18.79■□□□□ 0.6
TRIM4-202ENST00000354241 HDAC2Q92769 488 aaKnown RBP18.79■□□□□ 0.6
TRIM4-202ENST00000354241 HGDQ93099 445 aa18.79■□□□□ 0.6
TRIM4-202ENST00000354241 MPP4Q96JB8 637 aa18.79■□□□□ 0.6
TRIM4-202ENST00000354241 HS6ST2Q96MM7 605 aa18.79■□□□□ 0.6
TRIM4-202ENST00000354241 YTHDF1Q9BYJ9 559 aaKnown RBP18.79■□□□□ 0.6
TRIM4-202ENST00000354241 MRPS26Q9BYN8 205 aaKnown RBP18.79■□□□□ 0.6
TRIM4-202ENST00000354241 RNF6Q9Y252 685 aa18.79■□□□□ 0.6
TRIM4-202ENST00000354241 MED31Q9Y3C7 131 aa18.79■□□□□ 0.6
TRIM4-202ENST00000354241 A0A1W2PQ72 361 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 GNB5O14775 395 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 IFI30P13284 250 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 ENDOUP21128 410 aaKnown RBP18.78■□□□□ 0.6
TRIM4-202ENST00000354241 FPR3P25089 353 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 RBM48Q5RL73 367 aaKnown RBP18.78■□□□□ 0.6
TRIM4-202ENST00000354241 WBP2NLQ6ICG8 309 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 LAIR2Q6ISS4 152 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 KIF18BQ86Y91 864 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 CACTIN-AS1Q8N1I8 211 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 DEPDC4Q8N2C3 294 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 ZNF563Q8TA94 476 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 RASL10BQ96S79 203 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 GPR87Q9BY21 358 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 IMPAD1Q9NX62 359 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 LOC101059948A0A1B0GTJ6 334 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 EIF4E2O60573 245 aaKnown RBP18.78■□□□□ 0.6
TRIM4-202ENST00000354241 OR6B1O95007 311 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 ITPKBP27987 946 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 SLC6A8P48029 635 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 NOVA1P51513 510 aaKnown RBP18.78■□□□□ 0.6
TRIM4-202ENST00000354241 CDC42P60953 191 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 LYPD8Q6UX82 237 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 NUP54Q7Z3B4 507 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 DNAJA4Q8WW22 397 aaPredicted RBP18.78■□□□□ 0.6
TRIM4-202ENST00000354241 B3GNT4Q9C0J1 378 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 EGLN3Q9H6Z9 239 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 C20orf141Q9NUB4 165 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 FBXL4Q9UKA2 621 aa18.78■□□□□ 0.6
TRIM4-202ENST00000354241 M0R129 80 aa18.77■□□□□ 0.6
TRIM4-202ENST00000354241 ITGA10O75578 1167 aa18.77■□□□□ 0.6
TRIM4-202ENST00000354241 CEACAM1P13688 526 aa18.77■□□□□ 0.6
TRIM4-202ENST00000354241 FMO3P31513 532 aa18.77■□□□□ 0.6
TRIM4-202ENST00000354241 RBM34P42696 430 aaKnown RBP18.77■□□□□ 0.6
TRIM4-202ENST00000354241 PRKCDQ05655 676 aa18.77■□□□□ 0.6
TRIM4-202ENST00000354241 FCRLBQ6BAA4 426 aa18.77■□□□□ 0.6
TRIM4-202ENST00000354241 RASSF6Q6ZTQ3 369 aa18.77■□□□□ 0.6
TRIM4-202ENST00000354241 P3H2Q8IVL5 708 aa18.77■□□□□ 0.6
TRIM4-202ENST00000354241 CDK20Q8IZL9 346 aa18.77■□□□□ 0.6
TRIM4-202ENST00000354241 BPIFB6Q8NFQ5 453 aa18.77■□□□□ 0.6
TRIM4-202ENST00000354241 C3orf49Q96BT1 292 aa18.77■□□□□ 0.6
TRIM4-202ENST00000354241 KLHDC3Q9BQ90 382 aa18.77■□□□□ 0.6
TRIM4-202ENST00000354241 DPH1Q9BZG8 443 aa18.77■□□□□ 0.6
TRIM4-202ENST00000354241 ATP13A2Q9NQ11 1180 aa18.77■□□□□ 0.6
TRIM4-202ENST00000354241 MRPS18BQ9Y676 258 aaKnown RBP18.77■□□□□ 0.6
TRIM4-202ENST00000354241 PTPRBP23467 1997 aa18.77■□□□□ 0.59
TRIM4-202ENST00000354241 KLF4O43474 513 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 NUDT14O95848 222 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 EEF1B2P24534 225 aaKnown RBP18.76■□□□□ 0.59
TRIM4-202ENST00000354241 RBMS1P29558 406 aaKnown RBP18.76■□□□□ 0.59
TRIM4-202ENST00000354241 ST13P50502 369 aaKnown RBP18.76■□□□□ 0.59
TRIM4-202ENST00000354241 TOP3AQ13472 1001 aaPredicted RBP18.76■□□□□ 0.59
TRIM4-202ENST00000354241 APOFQ13790 326 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 SLC15A4Q8N697 577 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 IQCF1Q8N6M8 205 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 TEX47Q8TBZ9 253 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 TTC9Q92623 222 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 SLC1A7O00341 560 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 CDC42EP2O14613 210 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 TERTO14746 1132 aaKnown RBP18.76■□□□□ 0.59
TRIM4-202ENST00000354241 TM4SF5O14894 197 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 CLPTM1O96005 669 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 HPP00738 406 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 FBXO45P0C2W1 286 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 MAKP20794 623 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 IL10RAQ13651 578 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 SLX4IPQ5VYV7 408 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 LINC00114Q6XXX2 140 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 OR10G3Q8NGC4 313 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 DUSP19Q8WTR2 217 aa18.76■□□□□ 0.59
TRIM4-202ENST00000354241 BPIFA2Q96DR5 249 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms