RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SLC18B1Q6NT16 456 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 ANKRD53Q8N9V6 530 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 OR13C3Q8NGS6 347 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 FAM71F1Q96KD3 344 aaPredicted RBP12.75□□□□□ -0.37
SMC6-201ENST00000351948 CAMK2AQ9UQM7 478 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 GJE1A6NN92 205 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 VSTM5A8MXK1 200 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 EPHA4P54764 986 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 PITPNAQ00169 270 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 MANEAQ5SRI9 462 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 DLEU7Q6UYE1 221 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 ZNF782Q6ZMW2 699 aaPredicted RBP12.74□□□□□ -0.37
SMC6-201ENST00000351948 INIPQ9NRY2 104 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 RBMX2Q9Y388 322 aaKnown RBP12.74□□□□□ -0.37
SMC6-201ENST00000351948 hCG_1807616A0A1W2PRN6 198 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 HSPA12AO43301 675 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 PABPC4LP0CB38 370 aaKnown RBP12.74□□□□□ -0.37
SMC6-201ENST00000351948 SELENOVP59797 346 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 EIF2B1Q14232 305 aaKnown RBP12.74□□□□□ -0.37
SMC6-201ENST00000351948 FZD2Q14332 565 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 LRIF1Q5T3J3 769 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 OR7G2Q8NG99 324 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 CSF3RQ99062 836 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 ALG8Q9BVK2 526 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 LHPPQ9H008 270 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 CDCP1Q9H5V8 836 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 SLAMF7Q9NQ25 335 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 EXTL2Q9UBQ6 330 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 KLHL21Q9UJP4 597 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 IGHV1OR15-9A0A0B4J2B8 117 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 GALR3O60755 368 aaPredicted RBP12.74□□□□□ -0.37
SMC6-201ENST00000351948 HOXB3P14651 431 aaPredicted RBP12.74□□□□□ -0.37
SMC6-201ENST00000351948 DNASE1L3Q13609 305 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 ZNF547Q8IVP9 402 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 KDM8Q8N371 416 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 TMEM255BQ8WV15 326 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 CNOT9Q92600 299 aaKnown RBP12.74□□□□□ -0.37
SMC6-201ENST00000351948 UTP23Q9BRU9 249 aaKnown RBP12.74□□□□□ -0.37
SMC6-201ENST00000351948 ANKRD60Q9BZ19 345 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 IKZF5Q9H5V7 419 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 SACM1LQ9NTJ5 587 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 ST14Q9Y5Y6 855 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 NRG2O14511 850 aaPredicted RBP12.74□□□□□ -0.37
SMC6-201ENST00000351948 PIAS2O75928 621 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 LCATP04180 440 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 CXCR4P61073 352 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 DCAF7P61962 342 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 CCL7P80098 99 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 PROX2Q3B8N5 592 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 GUSBP11Q6P575 273 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 IQCF2Q8IXL9 164 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 GPALPP1Q8IXQ4 340 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 LAS2Q8IYD9 372 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 LSM14AQ8ND56 463 aaKnown RBP12.74□□□□□ -0.37
SMC6-201ENST00000351948 OR4F15Q8NGB8 312 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 ZFPM2Q8WW38 1151 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 LINC00615Q96LM1 132 aaPredicted RBP12.74□□□□□ -0.37
SMC6-201ENST00000351948 CCDC74BQ96LY2 380 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 FRMD6Q96NE9 622 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 TNFRSF13CQ96RJ3 184 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 ZNF160Q9HCG1 818 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 C14orf119Q9NWQ9 140 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 NTNG1Q9Y2I2 539 aa12.74□□□□□ -0.37
SMC6-201ENST00000351948 A0A1B0GWA3 101 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 VAMP1P23763 118 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 IDUAP35475 653 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 AQP2P41181 271 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 MFSD13AQ14CX5 517 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 OR1J4Q8NGS1 313 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 SLC30A2Q9BRI3 323 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 LMF2Q9BU23 707 aaKnown RBP12.73□□□□□ -0.37
SMC6-201ENST00000351948 NCOR1O75376 2440 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 CLDN24A6NM45 220 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 SUSD5O60279 629 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 FCMRO60667 390 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 CBFA2T3O75081 653 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 PPP1CAP62136 330 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 SMCO1Q147U7 214 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 SPIN3Q5JUX0 258 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 CWF19L1Q69YN2 538 aaKnown RBP12.73□□□□□ -0.37
SMC6-201ENST00000351948 S100A16Q96FQ6 103 aaKnown RBP12.73□□□□□ -0.37
SMC6-201ENST00000351948 NECAB3Q96P71 396 aaPredicted RBP12.73□□□□□ -0.37
SMC6-201ENST00000351948 POLE4Q9NR33 117 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 ENAMQ9NRM1 1142 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 UCKL1Q9NWZ5 548 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 NEU3Q9UQ49 428 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 GRIP1Q9Y3R0 1128 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 C7orf72A4D263 438 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 ZNF195O14628 629 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 KLK8O60259 260 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 ITIH1P19827 911 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 BCKDHBP21953 392 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 CHMP24386 653 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 CA5AP35218 305 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 FOXK1P85037 733 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 MRPL49Q13405 166 aaKnown RBP12.73□□□□□ -0.37
SMC6-201ENST00000351948 IHHQ14623 411 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 MAD2L1BPQ15013 274 aaPredicted RBP12.73□□□□□ -0.37
SMC6-201ENST00000351948 TFAP2CQ92754 450 aa12.73□□□□□ -0.37
SMC6-201ENST00000351948 SLC46A1Q96NT5 459 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms