RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 ACOT13Q9NPJ3 140 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 PCDHGA8Q9Y5G5 932 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 TCRBV5S2A0A599 114 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 PRKYO43930 277 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 LCMT2O60294 686 aaKnown RBP11.33□□□□□ -0.6
SMAD9-201ENST00000350148 STSP08842 583 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 SLC15A1P46059 708 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 DAP3P51398 398 aaKnown RBP11.33□□□□□ -0.6
SMAD9-201ENST00000350148 VLDLRP98155 873 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 FXNQ16595 210 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 AADACL4Q5VUY2 407 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 CA13Q8N1Q1 262 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 TMEM163Q8TC26 289 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 BPIFA2Q96DR5 249 aa11.33□□□□□ -0.6
SMAD9-201ENST00000350148 M0R036 132 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 CD40LGP29965 261 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 SMAD2Q15796 467 aaKnown RBP11.32□□□□□ -0.6
SMAD9-201ENST00000350148 CLPPQ16740 277 aaPredicted RBP11.32□□□□□ -0.6
SMAD9-201ENST00000350148 COX20Q5RI15 118 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 ZNF547Q8IVP9 402 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 CHDHQ8NE62 594 aaPredicted RBP11.32□□□□□ -0.6
SMAD9-201ENST00000350148 ACOT12Q8WYK0 555 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 HRASLS5Q96KN8 279 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 TCEAL7Q9BRU2 100 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 ABCB9Q9NP78 766 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 GNG8Q9UK08 70 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 PTRH2Q9Y3E5 179 aaKnown RBP11.32□□□□□ -0.6
SMAD9-201ENST00000350148 ANK1P16157 1881 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 IGHV1OR15-9A0A0B4J2B8 117 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 DSCR3O14972 297 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 CRABP1P29762 137 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 RBM34P42696 430 aaKnown RBP11.32□□□□□ -0.6
SMAD9-201ENST00000350148 MRPL2Q5T653 305 aaKnown RBP11.32□□□□□ -0.6
SMAD9-201ENST00000350148 SAMD8Q96LT4 415 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 LRRC61Q9BV99 259 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 GLS2Q9UI32 602 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 TMPRSS11EQ9UL52 423 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 NPIPA2E9PIF3 369 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 NPIPA3F8WFD2 350 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 ZNF264O43296 627 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 CRTAPO75718 401 aaPredicted RBP11.32□□□□□ -0.6
SMAD9-201ENST00000350148 CDK1P06493 297 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 SPARCP09486 303 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 NAT2P11245 290 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 FUT1P19526 365 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 CD1CP29017 333 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 TBCEQ15813 527 aaPredicted RBP11.32□□□□□ -0.6
SMAD9-201ENST00000350148 PGGHGQ32M88 737 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 SSX9Q7RTT3 188 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 UBQLN2Q9UHD9 624 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 ALG5Q9Y673 324 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 EIF4E2O60573 245 aaKnown RBP11.32□□□□□ -0.6
SMAD9-201ENST00000350148 TRAPPC6AO75865 159 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 APOC3P02656 99 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 FUCA1P04066 466 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 PRKCAP17252 672 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 ERP29P30040 261 aaKnown RBP11.32□□□□□ -0.6
SMAD9-201ENST00000350148 IDNKQ5T6J7 187 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 TMEM92Q6UXU6 159 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 SPARTQ8N0X7 666 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 THEM6Q8WUY1 208 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 C16orf58Q96GQ5 468 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 LRRC3BQ96PB8 259 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 CHRDQ9H2X0 955 aa11.32□□□□□ -0.6
SMAD9-201ENST00000350148 C7orf72A4D263 438 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 LGI1O95970 557 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 MSX1P28360 303 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 CSRP3P50461 194 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 OR1D5P58170 312 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 RHEBQ15382 184 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 ZNF385BQ569K4 471 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 NHSL2Q5HYW2 709 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 FAM111BQ6SJ93 734 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 P4HA3Q7Z4N8 544 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 SIAEQ9HAT2 523 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 CD93Q9NPY3 652 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 PAQR5Q9NXK6 330 aaPredicted RBP11.31□□□□□ -0.6
SMAD9-201ENST00000350148 TAS2R10Q9NYW0 307 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 OIP5O43482 229 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 FARS2O95363 451 aaKnown RBP11.31□□□□□ -0.6
SMAD9-201ENST00000350148 FCARP24071 287 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 CRHBPP24387 322 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 FKBP2P26885 142 aaKnown RBP11.31□□□□□ -0.6
SMAD9-201ENST00000350148 ETV1P50549 477 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 FZD2Q14332 565 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 EXT1Q16394 746 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 ABHD17BQ5VST6 288 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 CORO6Q6QEF8 472 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 ADGRF3Q8IZF5 1079 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 PNLDC1Q8NA58 520 aaKnown RBP11.31□□□□□ -0.6
SMAD9-201ENST00000350148 OIT3Q8WWZ8 545 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 CCDC74AQ96AQ1 378 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 CDC6Q99741 560 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 SAP130Q9H0E3 1048 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 FARSAQ9Y285 508 aaKnown RBP11.31□□□□□ -0.6
SMAD9-201ENST00000350148 A0A1W2PRQ8 180 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 WASHC1A8K0Z3 465 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 TSTD3H0UI37 97 aa11.31□□□□□ -0.6
SMAD9-201ENST00000350148 NUDT21O43809 227 aaKnown RBP11.31□□□□□ -0.6
SMAD9-201ENST00000350148 CDRT1O95170 752 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms