RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 HIST1H1BP16401 226 aaKnown RBP9.92□□□□□ -0.82
CAPN3-203ENST00000349748 ADH7P40394 386 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 DYRK1AQ13627 763 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 PCBP2Q15366 365 aaKnown RBP eCLIP9.92□□□□□ -0.82
CAPN3-203ENST00000349748 GFOD2Q3B7J2 385 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 C11orf88Q6PI97 169 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF546Q86UE3 836 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 OR6V1Q8N148 313 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 C15orf54Q8N8G6 183 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 NUBPLQ8TB37 319 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 SPRYD4Q8WW59 207 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-203ENST00000349748 C3orf49Q96BT1 292 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 TRIM62Q9BVG3 475 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 SEMA6CQ9H3T2 930 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 TAS2R5Q9NYW4 299 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 MKI67P46013 3256 aaKnown RBP9.92□□□□□ -0.82
CAPN3-203ENST00000349748 SMAD9O15198 467 aaKnown RBP9.92□□□□□ -0.82
CAPN3-203ENST00000349748 MMP2P08253 660 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 VSIG10L2P0DP72 767 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 PTHLHP12272 177 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 COX7A2P14406 83 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 PCGF2P35227 344 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 STAT5AP42229 794 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 HMGA2P52926 109 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 AP3S2P59780 193 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 SLC10A7Q0GE19 358 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 DHCR24Q15392 516 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 LINGO2Q7L985 606 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 FAM26EQ8N5C1 309 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 DNAAF1Q8NEP3 725 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 OR51S1Q8NGJ8 323 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 SORCS1Q8WY21 1168 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 SLC22A18Q96BI1 424 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 IMP4Q96G21 291 aaKnown RBP9.92□□□□□ -0.82
CAPN3-203ENST00000349748 SEC11CQ9BY50 192 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 METTL9Q9H1A3 318 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 C1GALT1Q9NS00 363 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 ASIC5Q9NY37 505 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 KLK11Q9UBX7 282 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 NDOR1Q9UHB4 597 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 PCDHB11Q9Y5F2 797 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 SIRT4Q9Y6E7 314 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-203ENST00000349748 ALPK3Q96L96 1907 aa9.92□□□□□ -0.82
CAPN3-203ENST00000349748 A0A1W2PPH5 198 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 OR14I1A6ND48 311 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 RFPL4AA6NLU0 287 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 RFPL4AL1F8VTS6 287 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 KIAA0355O15063 1070 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 FFAR2O15552 330 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 GPR39O43194 453 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 HBP1O60381 514 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 NFATC1O95644 943 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 IFNGP01579 166 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 USP17L7P0C7H9 530 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 ACP2P11117 423 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 TIMP2P16035 220 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 GABRR2P28476 465 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 ACVRL1P37023 503 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 MTNR1AP48039 350 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 LIM2P55344 173 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 LSM11P83369 360 aaKnown RBP eCLIP9.91□□□□□ -0.82
CAPN3-203ENST00000349748 RING1Q06587 406 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 ARHGAP1Q07960 439 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 ATXN7L3Q14CW9 347 aaPredicted RBP9.91□□□□□ -0.82
CAPN3-203ENST00000349748 RSU1Q15404 277 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 ELAVL1Q15717 326 aaKnown RBP9.91□□□□□ -0.82
CAPN3-203ENST00000349748 RPE65Q16518 533 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 TIGD5Q53EQ6 642 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 LIPNQ5VXI9 398 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 UBAC2Q8NBM4 344 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 SOCS4Q8WXH5 440 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 SMIM14Q96QK8 99 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 EGFL8Q99944 293 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 TMEM121BQ9BXQ6 578 aaPredicted RBP9.91□□□□□ -0.82
CAPN3-203ENST00000349748 GPN1Q9HCN4 374 aaPredicted RBP9.91□□□□□ -0.82
CAPN3-203ENST00000349748 NUDT4Q9NZJ9 180 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 IL20RAQ9UHF4 553 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF230Q9UIE0 474 aaPredicted RBP9.91□□□□□ -0.82
CAPN3-203ENST00000349748 FBXL21Q9UKT6 434 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 PLXNA1Q9UIW2 1896 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 MOXD2PA6NHM9 499 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 NPIPB9F8W1W9 429 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 SYT5O00445 386 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 TNFRSF10BO14763 440 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 APBB3O95704 486 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 ADAP00813 363 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 ADH1AP07327 375 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 DAOP14920 347 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 PBLDP30039 288 aaPredicted RBP9.91□□□□□ -0.82
CAPN3-203ENST00000349748 MAPK9P45984 424 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 RAB5CP51148 216 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 HNRNPKP61978 463 aaKnown RBP eCLIP9.91□□□□□ -0.82
CAPN3-203ENST00000349748 HTRA4P83105 476 aaPredicted RBP9.91□□□□□ -0.82
CAPN3-203ENST00000349748 CSRP2Q16527 193 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 JMJD6Q6NYC1 403 aaPredicted RBP9.91□□□□□ -0.82
CAPN3-203ENST00000349748 PAPD4Q6PIY7 484 aaKnown RBP9.91□□□□□ -0.82
CAPN3-203ENST00000349748 PIANPQ8IYJ0 282 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 RASGEF1AQ8N9B8 481 aa9.91□□□□□ -0.82
CAPN3-203ENST00000349748 FAM98AQ8NCA5 519 aaKnown RBP9.91□□□□□ -0.82
CAPN3-203ENST00000349748 OR10D4PQ8NGN7 298 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms