RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ARSKQ6UWY0 536 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 IGFL3Q6UXB1 125 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 RANBP3LQ86VV4 465 aaPredicted RBP17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 PLCZ1Q86YW0 608 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 C5orf34Q96MH7 638 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 GNRHR2Q96P88 292 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 ZNF559Q9BR84 538 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 EVA1AQ9H8M9 152 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 NTN4Q9HB63 628 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 RIMS3Q9UJD0 308 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 ACAD8Q9UKU7 415 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 TESMINQ9Y4I5 508 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 PKD1L2Q7Z442 2459 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 A0A1B0GWA3 101 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 ANKUB1A6NFN9 424 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 FMO6PO60774 539 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 CST1P01037 141 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 ITGB2P05107 769 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 FREM3P0C091 2139 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 RFPL3SP0C7P2 107 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 CD46P15529 392 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 RFC3P40938 356 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 MASP1P48740 699 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 FOXK1P85037 733 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 RIPK1Q13546 671 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 ATP6AP1Q15904 470 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 OR2T5Q6IEZ7 315 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 C19orf48Q6RUI8 117 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 PLEKHM3Q6ZWE6 761 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 TMEM179BQ7Z7N9 219 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 PACS2Q86VP3 889 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 PQLC1Q8N2U9 271 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 CADM2Q8N3J6 435 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 RBMXL3Q8N7X1 1067 aaKnown RBP17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 TOR1AIP2Q8NFQ8 470 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 OR2T29Q8NH02 315 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 ADAMTS16Q8TE57 1224 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 PRRC1Q96M27 445 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 PIP5K1AQ99755 562 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 FAM173AQ9BQD7 235 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 SEMA6AQ9H2E6 1030 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 AGPAT4Q9NRZ5 378 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 MAN2C1Q9NTJ4 1040 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 TP53TG5Q9Y2B4 290 aa17.28■□□□□ 0.36
CHMP4A-201ENST00000347519 CACNA1GO43497 2377 aa17.27■□□□□ 0.36
CHMP4A-201ENST00000347519 CLOCKO15516 846 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 ATP6V1G2O95670 118 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 FAM87AP0C7U9 286 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 ITGA2P17301 1181 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 FASP25445 335 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 MSX1P28360 303 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 RRM2P31350 389 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 SLC6A8P48029 635 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 MEOX1P50221 254 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 TAS2R41P59536 307 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 SPIBQ01892 262 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 CBFBQ13951 182 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 QPRTQ15274 297 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 FBXW10Q5XX13 1052 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 GDF7Q7Z4P5 450 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 ZADH2Q8N4Q0 377 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 PIK3C3Q8NEB9 887 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 OR4K17Q8NGC6 315 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 OR1J4Q8NGS1 313 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 SLC41A3Q96GZ6 507 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 DHRS1Q96LJ7 313 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 ZNF597Q96LX8 424 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 BARD1Q99728 777 aaKnown RBP17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 TRIM2Q9C040 744 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 DCLRE1BQ9H816 532 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 YY1AP1Q9H869 796 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 ACER3Q9NUN7 267 aa17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 KLF13Q9Y2Y9 288 aaPredicted RBP17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 FAM32AQ9Y421 112 aaKnown RBP17.27■□□□□ 0.35
CHMP4A-201ENST00000347519 DSPP15924 2871 aaKnown RBP17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 SHISA8B8ZZ34 492 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 FAAHO00519 579 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 NUDT14O95848 222 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 LDLRP01130 860 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 HOXB6P17509 224 aaKnown RBP17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 TCEA1P23193 301 aaKnown RBP17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 CDH12P55289 794 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 SUMO3P55854 103 aaPredicted RBP17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 WDR88Q6ZMY6 472 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 LSMEM1Q8N8F7 131 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 OR52J3Q8NH60 311 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 C1GALT1C1Q96EU7 318 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 ZNF347Q96SE7 839 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 PRSS27Q9BQR3 290 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 MFRPQ9BY79 579 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 NMNAT1Q9HAN9 279 aaPredicted RBP17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 RNPEPL1Q9HAU8 725 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 TMEM27Q9HBJ8 222 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 ZFP64Q9NPA5 681 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 MED17Q9NVC6 651 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 TAS2R10Q9NYW0 307 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 STX18Q9P2W9 335 aaKnown RBP17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 DNAJB9Q9UBS3 223 aa17.26■□□□□ 0.35
CHMP4A-201ENST00000347519 VDAC3Q9Y277 283 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms