RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 PEPDP12955 493 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 CA5AP35218 305 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 CD97P48960 835 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 STARP49675 285 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 TRA2BP62995 288 aaKnown RBP10.19□□□□□ -0.78
CLCN6-202ENST00000346436 ACTC1P68032 377 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 ACTA1P68133 377 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 HYAL1Q12794 435 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 KEAP1Q14145 624 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 ARL6IP1Q15041 203 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 SSC5DA1L4H1 1573 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 NKX6-3A6NJ46 265 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 UPK1BO75841 260 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 LCATP04180 440 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 ANXA3P12429 323 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 HOXD8P13378 290 aaPredicted RBP10.19□□□□□ -0.78
CLCN6-202ENST00000346436 AHRP35869 848 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 GAS6Q14393 721 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 ARHGAP11AQ6P4F7 1023 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 SERPINA11Q86U17 422 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 FAM83FQ8NEG4 500 aaPredicted RBP10.19□□□□□ -0.78
CLCN6-202ENST00000346436 ZNF578Q96N58 590 aaPredicted RBP10.19□□□□□ -0.78
CLCN6-202ENST00000346436 CTRCQ99895 268 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 MICU1Q9BPX6 476 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 SEC14L4Q9UDX3 406 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 ICKQ9UPZ9 632 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 ERVK-19Q9WJR5 959 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 CA5BQ9Y2D0 317 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 ZNF175Q9Y473 711 aa10.19□□□□□ -0.78
CLCN6-202ENST00000346436 GXYLT2A0PJZ3 443 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 SLC33A1O00400 549 aaPredicted RBP10.18□□□□□ -0.78
CLCN6-202ENST00000346436 RHCEP18577 417 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 GPR4P46093 362 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 ODF4Q2M2E3 257 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 LHX8Q68G74 356 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 GRHL2Q6ISB3 625 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 C5orf46Q6UWT4 87 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 OR52N2Q8NGI0 321 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 OR51Q1Q8NH59 317 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 CCDC107Q8WV48 283 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 THAP4Q8WY91 577 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 GGHQ92820 318 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 TMEM168Q9H0V1 697 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 LHX6Q9UPM6 363 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 UNC119BA6NIH7 251 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 TNFSF14O43557 240 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 ALOX12BO75342 701 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 JRKO75564 520 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 ARHGEF15O94989 841 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 DIRAS3O95661 229 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 NDUFV2P19404 249 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 RAB38P57729 211 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 HBA1P69905 142 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 MGAT3Q09327 533 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 POU4F2Q12837 409 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 LRIT3Q3SXY7 679 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 C1orf53Q5VUE5 145 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 FIGNL1Q6PIW4 674 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 SLC37A3Q8NCC5 494 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 GALNT6Q8NCL4 622 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 CADM4Q8NFZ8 388 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 OR6Q1Q8NGQ2 317 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 CPT1CQ8TCG5 803 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 TNFAIP8L1Q8WVP5 186 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 ZNF300Q96RE9 604 aaPredicted RBP10.18□□□□□ -0.78
CLCN6-202ENST00000346436 RHNO1Q9BSD3 238 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 CWH43Q9H720 699 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 VDAC3Q9Y277 283 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 FARSAQ9Y285 508 aaKnown RBP10.18□□□□□ -0.78
CLCN6-202ENST00000346436 HSPE1-MOB4S4R3N1 261 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 FER1L6Q2WGJ9 1857 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 ANKRD31Q8N7Z5 1873 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 A0A0G2JPF8 293 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 CENPBD1B2RD01 187 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 HNRNPCL3B7ZW38 293 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 CTDSP2O14595 271 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 ZNF432O94892 652 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 HNRNPCL4P0DMR1 293 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 MCCD1P59942 119 aaPredicted RBP10.18□□□□□ -0.78
CLCN6-202ENST00000346436 SIRPAP78324 504 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 ZNF77Q15935 545 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 ADPRMQ3LIE5 342 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 CCSMST1Q4G0I0 132 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 UBE2UQ5VVX9 321 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 ERMAPQ96PL5 475 aaPredicted RBP10.18□□□□□ -0.78
CLCN6-202ENST00000346436 FAM86C1Q9NVL1 165 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 GNG8Q9UK08 70 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 CLEC4EQ9ULY5 219 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 HSPB11Q9Y547 144 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 PAPPA2Q9BXP8 1791 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 SRCAPQ6ZRS2 3230 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 TCRBV5S2A0A599 114 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 RAD1O60671 282 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 EIF4EP06730 217 aaKnown RBP10.18□□□□□ -0.78
CLCN6-202ENST00000346436 EIF1P41567 113 aaKnown RBP10.18□□□□□ -0.78
CLCN6-202ENST00000346436 HOXC5Q00444 222 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 BEND4Q6ZU67 534 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 TMEM179BQ7Z7N9 219 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 ASB11Q8WXH4 323 aa10.18□□□□□ -0.78
CLCN6-202ENST00000346436 MBOAT4Q96T53 435 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms