RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 OR2T5Q6IEZ7 315 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 IGF2-ASQ6U949 168 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 SLC29A4Q7RTT9 530 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 BTLAQ7Z6A9 289 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 ZNF605Q86T29 641 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 ZBTB46Q86UZ6 589 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 SLC22A16Q86VW1 577 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 HS3ST5Q8IZT8 346 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 OR6T1Q8NGN1 323 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 OR2T29Q8NH02 315 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 OR8K3Q8NH51 312 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 NUBPLQ8TB37 319 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 IPCEF1Q8WWN9 437 aaPredicted RBP13.51□□□□□ -0.25
CXCL12-201ENST00000343575 FCGR1BQ92637 280 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 PROX1Q92786 737 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 PMM1Q92871 262 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 BARD1Q99728 777 aaKnown RBP13.51□□□□□ -0.25
CXCL12-201ENST00000343575 ARHGDIGQ99819 225 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 GABARAPL1Q9H0R8 117 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 IL17BQ9UHF5 180 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 ENPP4Q9Y6X5 453 aa13.51□□□□□ -0.25
CXCL12-201ENST00000343575 TRBV11-1A0A0K0K1C0 115 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 C21orf140B9A014 251 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 FRS3O43559 492 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 TSPAN2O60636 221 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 ANGPTL1O95841 491 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 THBS1P07996 1170 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 NID1P14543 1247 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 TPTEP56180 551 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 TGIF1Q15583 401 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 ZNF141Q15928 474 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 PDZK1Q5T2W1 519 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 PEX5LQ8IYB4 626 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 VANGL1Q8TAA9 524 aaPredicted RBP13.5□□□□□ -0.25
CXCL12-201ENST00000343575 THAP3Q8WTV1 239 aaPredicted RBP13.5□□□□□ -0.25
CXCL12-201ENST00000343575 DIO2Q92813 273 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 TP53INP1Q96A56 240 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 G6PC3Q9BUM1 346 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 PRR14Q9BWN1 585 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 GPR87Q9BY21 358 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 CCDC90BQ9GZT6 254 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 TPK1Q9H3S4 243 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 DSN1Q9H410 356 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 SMURF2Q9HAU4 748 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 NPAP1Q9NZP6 1156 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 PCDHGA10Q9Y5H3 936 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 SPTBN2O15020 2390 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 ASPMQ8IZT6 3477 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 CDHR4A6H8M9 788 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 PCDH17O14917 1159 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 DPM1O60762 260 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 ADAM11O75078 769 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 DXOO77932 396 aaKnown RBP13.5□□□□□ -0.25
CXCL12-201ENST00000343575 DBIP07108 87 aaKnown RBP13.5□□□□□ -0.25
CXCL12-201ENST00000343575 ABCD3P28288 659 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 DCTP40126 519 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 RPS15P62841 145 aaKnown RBP13.5□□□□□ -0.25
CXCL12-201ENST00000343575 CD300CQ08708 224 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 DECR1Q16698 335 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 BTBD16Q32M84 506 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 MRPL2Q5T653 305 aaKnown RBP13.5□□□□□ -0.25
CXCL12-201ENST00000343575 PLAG1Q6DJT9 500 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 APOOLQ6UXV4 268 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 APOL4Q9BPW4 351 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 OSGIN1Q9UJX0 560 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 U3KQV3 271 aa13.5□□□□□ -0.25
CXCL12-201ENST00000343575 CENPBD1B2RD01 187 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 PTGES3LE9PB15 166 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 HS6ST1O60243 411 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 IGHEP01854 428 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 IFNW1P05000 195 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 RBMS1P29558 406 aaKnown RBP13.49□□□□□ -0.25
CXCL12-201ENST00000343575 OTX2P32243 289 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 ZNF136P52737 540 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 ATP12AP54707 1039 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 SLC35A2P78381 396 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 HOXC5Q00444 222 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 ZNF45Q02386 682 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 Q0VFX4 171 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 HLA-DQA1Q5Y7H0 255 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 ANKRD34AQ69YU3 496 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 LAIR2Q6ISS4 152 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 NDUFAF7Q7L592 441 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 ADAMTS17Q8TE56 1095 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 ADOQ96SZ5 270 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 RTN4RQ9BZR6 473 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 ACER3Q9NUN7 267 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 KCND3Q9UK17 655 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 ACAD8Q9UKU7 415 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 A4GNTQ9UNA3 340 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 PCDHGA6Q9Y5G7 932 aa13.49□□□□□ -0.25
CXCL12-201ENST00000343575 WWP2O00308 870 aa13.48□□□□□ -0.25
CXCL12-201ENST00000343575 SNPHO15079 494 aa13.48□□□□□ -0.25
CXCL12-201ENST00000343575 RGS10O43665 173 aa13.48□□□□□ -0.25
CXCL12-201ENST00000343575 PRG2P13727 222 aa13.48□□□□□ -0.25
CXCL12-201ENST00000343575 ARHGDIAP52565 204 aa13.48□□□□□ -0.25
CXCL12-201ENST00000343575 IL5RAQ01344 420 aa13.48□□□□□ -0.25
CXCL12-201ENST00000343575 LAPTM4AQ15012 233 aa13.48□□□□□ -0.25
CXCL12-201ENST00000343575 LARS2Q15031 903 aaKnown RBP13.48□□□□□ -0.25
CXCL12-201ENST00000343575 KLHL26Q53HC5 615 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms