RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 NDUFS4O43181 175 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 CREBL2O60519 120 aaPredicted RBP8.97□□□□□ -0.97
HOXA1-201ENST00000343060 TMEM127O75204 238 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 CD1AP06126 327 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 TIMP2P16035 220 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 SLC2A5P22732 501 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 FKBP1BP68106 108 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 GPNMBQ14956 572 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 STK11Q15831 433 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 PABPC1L2AQ5JQF8 200 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 TXNDC8Q6A555 127 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 SFRP4Q6FHJ7 346 aaPredicted RBP8.97□□□□□ -0.97
HOXA1-201ENST00000343060 ATRAIDQ6UW56 229 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 SZRD1Q7Z422 152 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 VRK2Q86Y07 508 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 PM20D2Q8IYS1 436 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 LNX2Q8N448 690 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 OR10H4Q8NGA5 316 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 OR56A1Q8NGH5 318 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 LGALS14Q8TCE9 139 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 SLC2A12Q8TD20 617 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 TMEM255BQ8WV15 326 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 ORAI1Q96D31 301 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 C4orf36Q96KX1 117 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 LINC00615Q96LM1 132 aaPredicted RBP8.97□□□□□ -0.97
HOXA1-201ENST00000343060 AIF1LQ9BQI0 150 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 ORAI3Q9BRQ5 295 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 HCAR1Q9BXC0 346 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 ZDHHC5Q9C0B5 715 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 PITHD1Q9GZP4 211 aaPredicted RBP8.97□□□□□ -0.97
HOXA1-201ENST00000343060 SLC6A17Q9H1V8 727 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 TTYH1Q9H313 450 aaPredicted RBP8.97□□□□□ -0.97
HOXA1-201ENST00000343060 OR52D1Q9H346 318 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 MED20Q9H944 212 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 ADGRL4Q9HBW9 690 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 GPN1Q9HCN4 374 aaPredicted RBP8.97□□□□□ -0.97
HOXA1-201ENST00000343060 MRPL17Q9NRX2 175 aaKnown RBP8.97□□□□□ -0.97
HOXA1-201ENST00000343060 CALML5Q9NZT1 146 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 MRPS7Q9Y2R9 242 aaKnown RBP8.97□□□□□ -0.97
HOXA1-201ENST00000343060 ANKRD20A5PA0PJZ0 165 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 CDHR4A6H8M9 788 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 OGG1O15527 345 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 SULT1B1O43704 296 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 ARL6IP5O75915 188 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 HPP00738 406 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 HMGN2P05204 90 aaKnown RBP8.97□□□□□ -0.97
HOXA1-201ENST00000343060 ADRB1P08588 477 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 SBK2P0C263 348 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 NTSP30990 170 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 MNDAP41218 407 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 NCBP2P52298 156 aaKnown RBP eCLIP8.97□□□□□ -0.97
HOXA1-201ENST00000343060 PSMA6P60900 246 aaKnown RBP8.97□□□□□ -0.97
HOXA1-201ENST00000343060 KRT33BQ14525 404 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 LASP1Q14847 261 aaKnown RBP8.97□□□□□ -0.97
HOXA1-201ENST00000343060 SLC25A25Q6KCM7 469 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 FAM199XQ6PEV8 388 aaPredicted RBP8.97□□□□□ -0.97
HOXA1-201ENST00000343060 CDH26Q8IXH8 852 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 PDZD9Q8IXQ8 264 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 CFAP206Q8IYR0 622 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 NRSN1Q8IZ57 195 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 CMTM4Q8IZR5 234 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 SIPA1Q96FS4 1042 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 SLC38A3Q99624 504 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 DNTTIP1Q9H147 329 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 DPEP2Q9H4A9 486 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 KRCC1Q9NPI7 259 aaPredicted RBP8.97□□□□□ -0.97
HOXA1-201ENST00000343060 CMC2Q9NRP2 79 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 HAO2Q9NYQ3 351 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 KLHL9Q9P2J3 617 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 OPN4Q9UHM6 478 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 ZNF223Q9UK11 482 aaPredicted RBP8.97□□□□□ -0.97
HOXA1-201ENST00000343060 FBXL2Q9UKC9 423 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 SLC13A4Q9UKG4 626 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 CLEC4AQ9UMR7 237 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 KCNE3Q9Y6H6 103 aa8.97□□□□□ -0.97
HOXA1-201ENST00000343060 MDC1Q14676 2089 aaKnown RBP8.96□□□□□ -0.97
HOXA1-201ENST00000343060 UNC119BA6NIH7 251 aa8.96□□□□□ -0.97
HOXA1-201ENST00000343060 ZNF98A6NK75 572 aa8.96□□□□□ -0.97
HOXA1-201ENST00000343060 MAN2B1O00754 1011 aa8.96□□□□□ -0.97
HOXA1-201ENST00000343060 NUPL2O15504 423 aaKnown RBP8.96□□□□□ -0.97
HOXA1-201ENST00000343060 GATBO75879 557 aaKnown RBP8.96□□□□□ -0.97
HOXA1-201ENST00000343060 KRT33AO76009 404 aa8.96□□□□□ -0.97
HOXA1-201ENST00000343060 NDUFB6O95139 128 aa8.96□□□□□ -0.97
HOXA1-201ENST00000343060 PCDH8O95206 1070 aa8.96□□□□□ -0.97
HOXA1-201ENST00000343060 IL9P15248 144 aa8.96□□□□□ -0.97
HOXA1-201ENST00000343060 MAT2AP31153 395 aaKnown RBP8.96□□□□□ -0.97
HOXA1-201ENST00000343060 STXBP1P61764 594 aaKnown RBP8.96□□□□□ -0.97
HOXA1-201ENST00000343060 ACTC1P68032 377 aa8.96□□□□□ -0.97
HOXA1-201ENST00000343060 ACTA1P68133 377 aa8.96□□□□□ -0.97
HOXA1-201ENST00000343060 SLC7A9P82251 487 aa8.96□□□□□ -0.97
HOXA1-201ENST00000343060 MRPS10P82664 201 aaKnown RBP8.96□□□□□ -0.97
HOXA1-201ENST00000343060 MAT1AQ00266 395 aaKnown RBP8.96□□□□□ -0.97
HOXA1-201ENST00000343060 ZNF805Q5CZA5 627 aa8.96□□□□□ -0.97
HOXA1-201ENST00000343060 ZNF660Q6AZW8 331 aaPredicted RBP8.96□□□□□ -0.97
HOXA1-201ENST00000343060 GSG1LQ6UXU4 331 aa8.96□□□□□ -0.97
HOXA1-201ENST00000343060 NUDT18Q6ZVK8 323 aa8.96□□□□□ -0.97
HOXA1-201ENST00000343060 C17orf64Q86WR6 236 aa8.96□□□□□ -0.97
HOXA1-201ENST00000343060 CRIPAKQ8N1N5 446 aa8.96□□□□□ -0.97
HOXA1-201ENST00000343060 ZNF454Q8N9F8 522 aa8.96□□□□□ -0.97
HOXA1-201ENST00000343060 OR13C5Q8NGS8 318 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms