RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 NDC1Q9BTX1 674 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 EGLN1Q9GZT9 426 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 MRPL15Q9P015 296 aaKnown RBP17.25■□□□□ 0.35
SMPD1-201ENST00000342245 MARCH2Q9P0N8 246 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 PCDHGA5Q9Y5G8 931 aa17.25■□□□□ 0.35
SMPD1-201ENST00000342245 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.24■□□□□ 0.35
SMPD1-201ENST00000342245 OR6C74A6NCV1 312 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 TO15178 435 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 ARL6IP5O75915 188 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 AKR7A3O95154 331 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 ETHE1O95571 254 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 ABOP16442 354 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 SDHBP21912 280 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 ADCYAP1R1P41586 468 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 STARD6P59095 220 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 CXADRP78310 365 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 CAP1Q01518 475 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 SLC3A1Q07837 685 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 CNTN1Q12860 1018 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 UPP1Q16831 310 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 OR2B11Q5JQS5 317 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 HEPHL1Q6MZM0 1159 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 OR2W3Q7Z3T1 314 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 GJD3Q8N144 294 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 OR5D16Q8NGK9 328 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 OR1F2PQ96R84 312 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 FAM117AQ9C073 453 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 OR51I1Q9H343 314 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 ZFYVE1Q9HBF4 777 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 PRM3Q9NNZ6 103 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 MAN2C1Q9NTJ4 1040 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 TAS2R10Q9NYW0 307 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 GHRLQ9UBU3 117 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 E7EQ34 232 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 GOSR2O14653 212 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 OAZ2O95190 189 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 ADCYAP1P18509 176 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 GCGRP47871 477 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 DEFA6Q01524 100 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 OR7E24Q6IFN5 339 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 SLC36A1Q7Z2H8 476 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 ADCK2Q7Z695 626 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 TECPR1Q7Z6L1 1165 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 THOC6Q86W42 341 aaKnown RBP17.24■□□□□ 0.35
SMPD1-201ENST00000342245 C15orf54Q8N8G6 183 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 OR52I2Q8NH67 350 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 ZNF671Q8TAW3 534 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 SKA2Q8WVK7 121 aaPredicted RBP17.24■□□□□ 0.35
SMPD1-201ENST00000342245 ZFPM2Q8WW38 1151 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 TMEM40Q8WWA1 233 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 CNTNAP3BQ96NU0 1288 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 CAMK1GQ96NX5 476 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 QRSL1Q9H0R6 528 aaKnown RBP17.24■□□□□ 0.35
SMPD1-201ENST00000342245 OPA3Q9H6K4 179 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 IL26Q9NPH9 171 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 PCDHB10Q9UN67 800 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 CCDC88CQ9P219 2028 aa17.24■□□□□ 0.35
SMPD1-201ENST00000342245 BCL2L11O43521 198 aa17.23■□□□□ 0.35
SMPD1-201ENST00000342245 ACSM3Q53FZ2 586 aa17.23■□□□□ 0.35
SMPD1-201ENST00000342245 FAM71E1Q6IPT2 247 aa17.23■□□□□ 0.35
SMPD1-201ENST00000342245 OVCH1Q7RTY7 1134 aa17.23■□□□□ 0.35
SMPD1-201ENST00000342245 ZNF546Q86UE3 836 aa17.23■□□□□ 0.35
SMPD1-201ENST00000342245 NAA40Q86UY6 237 aa17.23■□□□□ 0.35
SMPD1-201ENST00000342245 ZNF561Q8N587 486 aa17.23■□□□□ 0.35
SMPD1-201ENST00000342245 TREM2Q9NZC2 230 aa17.23■□□□□ 0.35
SMPD1-201ENST00000342245 NRG3P56975 720 aa17.23■□□□□ 0.35
SMPD1-201ENST00000342245 RBMS2Q15434 407 aaKnown RBP17.23■□□□□ 0.35
SMPD1-201ENST00000342245 FAM27D1Q5T7N8 215 aa17.23■□□□□ 0.35
SMPD1-201ENST00000342245 ADGRG2Q8IZP9 1017 aa17.23■□□□□ 0.35
SMPD1-201ENST00000342245 APCDD1Q8J025 514 aa17.23■□□□□ 0.35
SMPD1-201ENST00000342245 CBARPQ8N350 705 aaPredicted RBP17.23■□□□□ 0.35
SMPD1-201ENST00000342245 OR1J4Q8NGS1 313 aa17.23■□□□□ 0.35
SMPD1-201ENST00000342245 PEX11GQ96HA9 241 aa17.23■□□□□ 0.35
SMPD1-201ENST00000342245 NMRK2Q9NPI5 230 aa17.23■□□□□ 0.35
SMPD1-201ENST00000342245 DAPL1A0PJW8 107 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 TYMPP19971 482 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 ARFIP1P53367 373 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 CRYBB1P53674 252 aaPredicted RBP17.22■□□□□ 0.35
SMPD1-201ENST00000342245 NKAIN4Q8IVV8 208 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 KLHDC8AQ8IYD2 350 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 CMTM4Q8IZR5 234 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 PXYLP1Q8TE99 480 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 C16orf78Q8WTQ4 265 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 EXOSC8Q96B26 276 aaKnown RBP17.22■□□□□ 0.35
SMPD1-201ENST00000342245 PFDN5Q99471 154 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 MRI1Q9BV20 369 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 EDEM2Q9BV94 578 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 ATG10Q9H0Y0 220 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 TMEM138Q9NPI0 162 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 MRPL17Q9NRX2 175 aaKnown RBP17.22■□□□□ 0.35
SMPD1-201ENST00000342245 ZDHHC3Q9NYG2 299 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 MBLAC1A4D2B0 266 aaPredicted RBP17.22■□□□□ 0.35
SMPD1-201ENST00000342245 M0QZQ0 153 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 MAN2B1O00754 1011 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 ZNF197O14709 1029 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 CXCL14O95715 111 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 GKN3PP0CG01 181 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 ACHEP22303 614 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 SORDQ00796 357 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 ACER2Q5QJU3 275 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms