RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 OR2L5Q8NG80 312 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 OR5D16Q8NGK9 328 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 TEX47Q8TBZ9 253 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 NXPE2Q96DL1 559 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 BBS4Q96RK4 519 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 SECISBP2Q96T21 854 aaKnown RBP17.43■□□□□ 0.38
PSPC1-201ENST00000338910 UBE2ZQ9H832 354 aaPredicted RBP17.43■□□□□ 0.38
PSPC1-201ENST00000338910 APOBEC3BQ9UH17 382 aaKnown RBP17.43■□□□□ 0.38
PSPC1-201ENST00000338910 GPR171O14626 319 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 CASC3O15234 703 aaKnown RBP17.43■□□□□ 0.38
PSPC1-201ENST00000338910 APBB3O95704 486 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 DNASE1P24855 282 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 MTNR1BP49286 362 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 ZNF425Q6IV72 752 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 IL20RBQ6UXL0 311 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 MEX3DQ86XN8 651 aaKnown RBP17.43■□□□□ 0.38
PSPC1-201ENST00000338910 KCT2Q8NC54 265 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 OR52N1Q8NH53 320 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 SPRYD4Q8WW59 207 aaPredicted RBP17.43■□□□□ 0.38
PSPC1-201ENST00000338910 XAGE5Q8WWM1 108 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 WBP1Q96G27 269 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 MS4A3Q96HJ5 214 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 RADILQ96JH8 1075 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 ABHD1Q96SE0 405 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 GSX2Q9BZM3 304 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 SERHL2Q9H4I8 314 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 DLL4Q9NR61 685 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 LYARQ9NX58 379 aaKnown RBP17.43■□□□□ 0.38
PSPC1-201ENST00000338910 MDC1Q14676 2089 aaKnown RBP17.43■□□□□ 0.38
PSPC1-201ENST00000338910 VCANP13611 3396 aa17.43■□□□□ 0.38
PSPC1-201ENST00000338910 A0A1W2PS29 197 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 ATP6V1G2-DDX39BF2Z307 99 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 KHNYNO15037 678 aaKnown RBP17.42■□□□□ 0.38
PSPC1-201ENST00000338910 SEMA4FO95754 770 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 SULT1A3P0DMM9 295 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 SULT1A4P0DMN0 295 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 THBS2P35442 1172 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 RAB14P61106 215 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 CCDC116Q8IYX3 515 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 MFSD9Q8NBP5 474 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 SLC38A2Q96QD8 506 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 C6orf106Q9H6K1 298 aaPredicted RBP17.42■□□□□ 0.38
PSPC1-201ENST00000338910 ZCCHC3Q9NUD5 404 aaKnown RBP17.42■□□□□ 0.38
PSPC1-201ENST00000338910 C2orf42Q9NWW7 574 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 TRPC4Q9UBN4 977 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 A0A1B0GVC2 190 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 PRAMEF27A3QJZ7 478 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 A6NIN4 97 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 IGHA1P01876 353 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 GBX2P52951 348 aaPredicted RBP17.42■□□□□ 0.38
PSPC1-201ENST00000338910 ALG11Q2TAA5 492 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 HSD17B12Q53GQ0 312 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 HACD4Q5VWC8 232 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 Q6ZSR6 202 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 MS4A15Q8N5U1 240 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 SAMD12Q8N8I0 201 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 KLHL15Q96M94 604 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 ZNF578Q96N58 590 aaPredicted RBP17.42■□□□□ 0.38
PSPC1-201ENST00000338910 YIPF4Q9BSR8 244 aa17.42■□□□□ 0.38
PSPC1-201ENST00000338910 A0A1W2PPL8 197 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 SLC28A2O43868 658 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 NPR2P20594 1047 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 NDUFS1P28331 727 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 MAP2K6P52564 334 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 BTN3A2P78410 334 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 SYPL1Q16563 259 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 PRRT3Q5FWE3 981 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 AADACL4Q5VUY2 407 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 GARNL3Q5VVW2 1013 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 TMEM81Q6P7N7 255 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 LYPD4Q6UWN0 246 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 OLIG3Q7RTU3 272 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 OR6T1Q8NGN1 323 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 KCTD12Q96CX2 325 aaKnown RBP17.41■□□□□ 0.38
PSPC1-201ENST00000338910 CNRIP1Q96F85 164 aaPredicted RBP17.41■□□□□ 0.38
PSPC1-201ENST00000338910 GAS2L1Q99501 681 aaPredicted RBP17.41■□□□□ 0.38
PSPC1-201ENST00000338910 OR51I1Q9H343 314 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 KLF15Q9UIH9 416 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 CYP8B1Q9UNU6 501 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 MAB21L2Q9Y586 359 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 ARHGEF17Q96PE2 2063 aaPredicted RBP17.41■□□□□ 0.38
PSPC1-201ENST00000338910 RGS9O75916 674 aaPredicted RBP17.41■□□□□ 0.38
PSPC1-201ENST00000338910 AIFM1O95831 613 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 EPPINO95925 133 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 NTSP30990 170 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 SNRPNP63162 240 aaKnown RBP17.41■□□□□ 0.38
PSPC1-201ENST00000338910 DUSP2Q05923 314 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 ST3GAL2Q16842 350 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 GSG1Q2KHT4 349 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 MRM1Q6IN84 353 aaKnown RBP17.41■□□□□ 0.38
PSPC1-201ENST00000338910 KLBQ86Z14 1044 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
PSPC1-201ENST00000338910 OR10G6Q8NH81 332 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 PATE1Q8WXA2 126 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 ADAMTS14Q8WXS8 1223 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 RFKQ969G6 155 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 PMEPA1Q969W9 287 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 ZNF764Q96H86 408 aaPredicted RBP17.41■□□□□ 0.38
PSPC1-201ENST00000338910 SARGQ9BW04 601 aa17.41■□□□□ 0.38
PSPC1-201ENST00000338910 CDCP1Q9H5V8 836 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms