RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 LILRA2Q8N149 483 aa13.38□□□□□ -0.27
KATNA1-201ENST00000335643 CNEP1R1Q8N9A8 125 aa13.38□□□□□ -0.27
KATNA1-201ENST00000335643 THUMPD3Q9BV44 507 aaKnown RBP13.38□□□□□ -0.27
KATNA1-201ENST00000335643 LAT2Q9GZY6 243 aa13.38□□□□□ -0.27
KATNA1-201ENST00000335643 TPT1P8Q9HAU6 139 aa13.38□□□□□ -0.27
KATNA1-201ENST00000335643 MCCC2Q9HCC0 563 aa13.38□□□□□ -0.27
KATNA1-201ENST00000335643 HHATLQ9HCP6 504 aa13.38□□□□□ -0.27
KATNA1-201ENST00000335643 GALNT8Q9NY28 637 aa13.38□□□□□ -0.27
KATNA1-201ENST00000335643 SLC25A37Q9NYZ2 338 aa13.38□□□□□ -0.27
KATNA1-201ENST00000335643 CCDC167Q9P0B6 97 aa13.38□□□□□ -0.27
KATNA1-201ENST00000335643 PCDHB14Q9Y5E9 798 aa13.38□□□□□ -0.27
KATNA1-201ENST00000335643 ANKRD17O75179 2603 aaKnown RBP13.38□□□□□ -0.27
KATNA1-201ENST00000335643 ETV2O00321 342 aaPredicted RBP13.37□□□□□ -0.27
KATNA1-201ENST00000335643 EDF1O60869 148 aaKnown RBP13.37□□□□□ -0.27
KATNA1-201ENST00000335643 ZCCHC18P0CG32 403 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 MYBPHQ13203 477 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 CBFBQ13951 182 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 SGCBQ16585 318 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 SLC25A53Q5H9E4 307 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 PAGE3Q5JUK9 113 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 C6orf10Q5SRN2 563 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 PPP4R4Q6NUP7 873 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 BLOC1S3Q6QNY0 202 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 MSANTD1Q6ZTZ1 278 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 BTLAQ7Z6A9 289 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 C10orf111Q8N326 155 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 TOR1AIP2Q8NFQ8 470 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 ITCHQ96J02 903 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 KLHL15Q96M94 604 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 TRNT1Q96Q11 434 aaKnown RBP13.37□□□□□ -0.27
KATNA1-201ENST00000335643 SRXN1Q9BYN0 137 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 COQ10BQ9H8M1 238 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 POLE3Q9NRF9 147 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 KCNN3Q9UGI6 736 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 DCTN4Q9UJW0 460 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 CLEC4AQ9UMR7 237 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 ZNF175Q9Y473 711 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 GPC6Q9Y625 555 aaPredicted RBP13.37□□□□□ -0.27
KATNA1-201ENST00000335643 A8MXE2 369 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 NR5A2O00482 541 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 ANP32DO95626 131 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 CGAP01215 116 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 NUDT7P0C024 238 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 RPS4Y1P22090 263 aaKnown RBP13.37□□□□□ -0.27
KATNA1-201ENST00000335643 ELK4P28324 431 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 EIF1P41567 113 aaKnown RBP13.37□□□□□ -0.27
KATNA1-201ENST00000335643 RPS3AP61247 264 aaKnown RBP13.37□□□□□ -0.27
KATNA1-201ENST00000335643 STX1BP61266 288 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 HPCAP84074 193 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 ESPNLQ6ZVH7 1005 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 EIF3MQ7L2H7 374 aaKnown RBP13.37□□□□□ -0.27
KATNA1-201ENST00000335643 ATP6V1C2Q8NEY4 427 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 OR2V1Q8NHB1 315 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 CNOT9Q92600 299 aaKnown RBP13.37□□□□□ -0.27
KATNA1-201ENST00000335643 ZNF559Q9BR84 538 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 RBM24Q9BX46 236 aaKnown RBP13.37□□□□□ -0.27
KATNA1-201ENST00000335643 OPN3Q9H1Y3 402 aaPredicted RBP13.37□□□□□ -0.27
KATNA1-201ENST00000335643 ZNF385DQ9H6B1 395 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 RMND5AQ9H871 391 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 NPHS2Q9NP85 383 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 PACSIN3Q9UKS6 424 aa13.37□□□□□ -0.27
KATNA1-201ENST00000335643 DSPPQ9NZW4 1301 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 AGAP5A6NIR3 686 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 SMNDC1O75940 238 aaKnown RBP eCLIP13.36□□□□□ -0.27
KATNA1-201ENST00000335643 KRT75O95678 551 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 TFPTP0C1Z6 253 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 KLK2P20151 261 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 ADH6P28332 368 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 CRATP43155 626 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 KIR2DL3P43628 341 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 SESN3P58005 492 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 KCNJ10P78508 379 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 RPS26P11Q5JNZ5 115 aaPredicted RBP13.36□□□□□ -0.27
KATNA1-201ENST00000335643 HBMQ6B0K9 141 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 OR2A2Q6IF42 318 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 ZNF474Q6S9Z5 364 aaPredicted RBP13.36□□□□□ -0.27
KATNA1-201ENST00000335643 LRRC74BQ6ZQY2 392 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 LINC01560Q8TB33 94 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 OSTF1Q92882 214 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 SPDL1Q96EA4 605 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 MRGPRX4Q96LA9 322 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 ACBD3Q9H3P7 528 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 LIPT1Q9Y234 373 aa13.36□□□□□ -0.27
KATNA1-201ENST00000335643 MPDZO75970 2070 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 MAP1AP78559 2803 aaPredicted RBP13.35□□□□□ -0.27
KATNA1-201ENST00000335643 A0A1W2PNR3 127 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 AP3D1O14617 1153 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 BCHEP06276 602 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 CRHP06850 196 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 NR2F1P10589 423 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 ME2P23368 584 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 RYKP34925 604 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 DSTNP60981 165 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 ZNF239Q16600 458 aaKnown RBP13.35□□□□□ -0.27
KATNA1-201ENST00000335643 TMEM176BQ3YBM2 270 aaPredicted RBP13.35□□□□□ -0.27
KATNA1-201ENST00000335643 AGKQ53H12 422 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 LRIF1Q5T3J3 769 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 CGB2Q6NT52 195 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 SLC38A5Q8WUX1 472 aa13.35□□□□□ -0.27
KATNA1-201ENST00000335643 ROBO4Q8WZ75 1007 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms