RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SNX4O95219 450 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 LYPD3O95274 346 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 LDLRP01130 860 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 LINGO3P0C6S8 592 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 CNR1P21554 472 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 RRM2P31350 389 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 IST1P53990 364 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 PPP1R8Q12972 351 aaKnown RBP19.58■□□□□ 0.72
TPM1-204ENST00000334895 SLC25A25Q6KCM7 469 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 PLEKHM3Q6ZWE6 761 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 LSMEM1Q8N8F7 131 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 PIK3C3Q8NEB9 887 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 TOR1AIP2Q8NFQ8 470 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 SCMH1Q96GD3 660 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 DHRS1Q96LJ7 313 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.58■□□□□ 0.72
TPM1-204ENST00000334895 DSN1Q9H410 356 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 NMNAT1Q9HAN9 279 aaPredicted RBP19.58■□□□□ 0.72
TPM1-204ENST00000334895 KLHL1Q9NR64 748 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 MAN2C1Q9NTJ4 1040 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 ATMQ13315 3056 aa19.58■□□□□ 0.72
TPM1-204ENST00000334895 ANKUB1A6NFN9 424 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 LRRC3CA6NJW4 275 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 FAAHO00519 579 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 NME2P1O60361 137 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 DPM1O60762 260 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 DEAF1O75398 565 aaPredicted RBP19.57■□□□□ 0.72
TPM1-204ENST00000334895 WISP1O95388 367 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 SP1P08047 785 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 NME2P22392 152 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 SLC6A8P48029 635 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 TAS2R41P59536 307 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 IGFL3Q6UXB1 125 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 TMEM179BQ7Z7N9 219 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 PACS2Q86VP3 889 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 CYP4Z1Q86W10 505 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 PLCZ1Q86YW0 608 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 OFCC1Q8IZS5 231 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 TRIM2Q9C040 744 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 ACER3Q9NUN7 267 aa19.57■□□□□ 0.72
TPM1-204ENST00000334895 TUBA8Q9NY65 449 aaPredicted RBP19.57■□□□□ 0.72
TPM1-204ENST00000334895 C6orf203Q9P0P8 240 aaPredicted RBP19.57■□□□□ 0.72
TPM1-204ENST00000334895 NBEAQ8NFP9 2946 aa19.56■□□□□ 0.72
TPM1-204ENST00000334895 A0A1B0GWA3 101 aa19.56■□□□□ 0.72
TPM1-204ENST00000334895 OR5F1O95221 314 aa19.56■□□□□ 0.72
TPM1-204ENST00000334895 MSX1P28360 303 aa19.56■□□□□ 0.72
TPM1-204ENST00000334895 IDH2P48735 452 aaKnown RBP19.56■□□□□ 0.72
TPM1-204ENST00000334895 CDH12P55289 794 aa19.56■□□□□ 0.72
TPM1-204ENST00000334895 SUMO3P55854 103 aaPredicted RBP19.56■□□□□ 0.72
TPM1-204ENST00000334895 SPIBQ01892 262 aa19.56■□□□□ 0.72
TPM1-204ENST00000334895 FOXO1Q12778 655 aa19.56■□□□□ 0.72
TPM1-204ENST00000334895 CBFBQ13951 182 aa19.56■□□□□ 0.72
TPM1-204ENST00000334895 TIGD3Q6B0B8 471 aa19.56■□□□□ 0.72
TPM1-204ENST00000334895 ARSKQ6UWY0 536 aa19.56■□□□□ 0.72
TPM1-204ENST00000334895 GDF7Q7Z4P5 450 aa19.56■□□□□ 0.72
TPM1-204ENST00000334895 SULF2Q8IWU5 870 aa19.56■□□□□ 0.72
TPM1-204ENST00000334895 CADM2Q8N3J6 435 aa19.56■□□□□ 0.72
TPM1-204ENST00000334895 OR2M7Q8NG81 312 aa19.56■□□□□ 0.72
TPM1-204ENST00000334895 CENPNQ96H22 339 aaPredicted RBP19.56■□□□□ 0.72
TPM1-204ENST00000334895 LYVE1Q9Y5Y7 322 aa19.56■□□□□ 0.72
TPM1-204ENST00000334895 A0A0B4J2E0 115 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 A0A1B0GX12 115 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 NTN1O95631 604 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 ITGB2P05107 769 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 CD46P15529 392 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 LIMS1P48059 325 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 MASP1P48740 699 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 ZNF766Q5HY98 468 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 ZNF613Q6PF04 617 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 GALNTL5Q7Z4T8 443 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 OR4C15Q8NGM1 316 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 SLC39A7Q92504 469 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 SLC41A3Q96GZ6 507 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 JSRP1Q96MG2 331 aaPredicted RBP19.55■□□□□ 0.72
TPM1-204ENST00000334895 GNRHR2Q96P88 292 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 POLR2J2Q9GZM3 115 aaKnown RBP19.55■□□□□ 0.72
TPM1-204ENST00000334895 POLR2J3Q9H1A7 115 aaKnown RBP19.55■□□□□ 0.72
TPM1-204ENST00000334895 TMEM27Q9HBJ8 222 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 HHATLQ9HCP6 504 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 U3KQV3 271 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 NCKAP5O14513 1909 aa19.55■□□□□ 0.72
TPM1-204ENST00000334895 TRAPPC13A5PLN9 417 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 MKRN2OSH3BPM6 223 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 ADAMDEC1O15204 470 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 CDC40O60508 579 aaKnown RBP eCLIP19.54■□□□□ 0.72
TPM1-204ENST00000334895 NUDT14O95848 222 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 H1F0P07305 194 aaKnown RBP19.54■□□□□ 0.72
TPM1-204ENST00000334895 PGCP20142 388 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 SLC34A1Q06495 639 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 FOXD4Q12950 439 aaPredicted RBP19.54■□□□□ 0.72
TPM1-204ENST00000334895 QPRTQ15274 297 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 OR4K17Q8NGC6 315 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 OR1J4Q8NGS1 313 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 OR52J3Q8NH60 311 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 C3orf49Q96BT1 292 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 ZNF597Q96LX8 424 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 C5orf34Q96MH7 638 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 NPAS1Q99742 590 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 FAM173AQ9BQD7 235 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 FUZQ9BT04 418 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms