RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 LMX1AQ8TE12 382 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 IFT22Q9H7X7 185 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 YIPF1Q9Y548 306 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 DCCP43146 1447 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 CEBPZOSA8MTT3 80 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 NUDT21O43809 227 aaKnown RBP9.23□□□□□ -0.93
COL4A6-201ENST00000334504 EGFP01133 1207 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 DHRS4L1P0CG22 281 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 CPN1P15169 458 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 G0S2P27469 103 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 UPP1Q16831 310 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 ADAM5Q6NVV9 412 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 FAM199XQ6PEV8 388 aaPredicted RBP9.23□□□□□ -0.93
COL4A6-201ENST00000334504 Q6ZVL8 140 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 ISCA2Q86U28 154 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 ANKRD53Q8N9V6 530 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 OR1E3Q8WZA6 343 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 FUBP1Q96AE4 644 aaKnown RBP9.23□□□□□ -0.93
COL4A6-201ENST00000334504 ACTRT3Q9BYD9 372 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 GLTPD2A6NH11 291 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 ARHGAP33O14559 1287 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 MPPED1O15442 326 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 SULT1C4O75897 302 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF44P15621 663 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 IMPA1P29218 277 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF836Q6ZNA1 936 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 SLC51BQ86UW2 128 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 NXF5Q9H1B4 397 aaKnown RBP9.23□□□□□ -0.93
COL4A6-201ENST00000334504 FKRPQ9H9S5 495 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 OR1A2Q9Y585 309 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 LALBAP00709 142 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 GYPBP06028 91 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 CPT2P23786 658 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 CASP6P55212 293 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 OR2G6Q5TZ20 316 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 LETMD1Q6P1Q0 360 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 CYS1Q717R9 158 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 CADM3Q8N126 398 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 GPR137CQ8N3F9 429 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 OR4F15Q8NGB8 312 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 SUSD3Q96L08 255 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 GSTO2Q9H4Y5 243 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 C5AR2Q9P296 337 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 H7C1Q1 480 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 PRPS1P60891 318 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 ADIRFQ15847 76 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF74Q16587 644 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 RBMS3Q6XE24 437 aaKnown RBP9.23□□□□□ -0.93
COL4A6-201ENST00000334504 HIST2H3AQ71DI3 136 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 DCAF4L2Q8NA75 395 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 OR10R2Q8NGX6 335 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF778Q96MU6 729 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 RNF39Q9H2S5 420 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 GORASP2Q9H8Y8 452 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 USP36Q9P275 1121 aaKnown RBP9.23□□□□□ -0.93
COL4A6-201ENST00000334504 SERTAD3Q9UJW9 196 aa9.23□□□□□ -0.93
COL4A6-201ENST00000334504 GPR37L1O60883 481 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 DFFBO76075 338 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 ZIC2O95409 532 aaPredicted RBP9.22□□□□□ -0.93
COL4A6-201ENST00000334504 ACP2P11117 423 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 FOLR1P15328 257 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 PSMB1P20618 241 aaKnown RBP9.22□□□□□ -0.93
COL4A6-201ENST00000334504 LBX1P52954 281 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 SEC61A1P61619 476 aaKnown RBP9.22□□□□□ -0.93
COL4A6-201ENST00000334504 SPOCK1Q08629 439 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 SLX4IPQ5VYV7 408 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 MEPCEQ7L2J0 689 aaKnown RBP9.22□□□□□ -0.93
COL4A6-201ENST00000334504 SCAMP4Q969E2 229 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 CPNE4Q96A23 557 aaPredicted RBP9.22□□□□□ -0.93
COL4A6-201ENST00000334504 DDIT4LQ96D03 193 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 SLC39A13Q96H72 371 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 UHRF2Q96PU4 802 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF768Q9H5H4 540 aaKnown RBP9.22□□□□□ -0.93
COL4A6-201ENST00000334504 FBXL12Q9NXK8 326 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 BABAM2Q9NXR7 383 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 LMTK2Q8IWU2 1503 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 FRS3O43559 492 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 HBE1P02100 147 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 TCRBP04435 133 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 ADRB1P08588 477 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 RAB40ALP0C0E4 278 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 SERPINA2P20848 420 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 CCR6P51684 374 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 PLGLAQ15195 96 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 RAET1LQ5VY80 246 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 H3F3CQ6NXT2 135 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 SBSNQ6UWP8 590 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 OR6F1Q8NGZ6 308 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 RAB40AQ8WXH6 277 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 NIPSNAP3BQ9BS92 247 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 C1GALT1Q9NS00 363 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 HRASLS2Q9NWW9 162 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 VAPAQ9P0L0 249 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 LRP5LA4QPB2 252 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 PEX12O00623 359 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 GALTP07902 379 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 PRSS56P0CW18 603 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 HLA-DOBP13765 273 aa9.22□□□□□ -0.93
COL4A6-201ENST00000334504 APEHP13798 732 aaKnown RBP9.22□□□□□ -0.93
COL4A6-201ENST00000334504 ZNF43P17038 809 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms