RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 FTMTQ8N4E7 242 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 LINC01555Q8NAE3 123 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 OR7G1Q8NGA0 311 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 TANKQ92844 425 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 RIT1Q92963 219 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 PMEPA1Q969W9 287 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 TXNDC15Q96J42 360 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 SLC6A15Q9H2J7 730 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 ELL3Q9HB65 397 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-201ENST00000334136 PRODH2Q9UF12 536 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 UBQLN2Q9UHD9 624 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 C2orf16Q68DN1 1984 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 AGR2O95994 175 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 PLATP00750 562 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 EDNRAP25101 427 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 CASRP41180 1078 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 GPR4P46093 362 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 GCGRP47871 477 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 GBX2P52951 348 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-201ENST00000334136 TMEM44Q2T9K0 475 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 TMEM151BQ8IW70 566 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 OR52N2Q8NGI0 321 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 OR8K3Q8NH51 312 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 OR51Q1Q8NH59 317 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 OR2A14Q96R47 310 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 SPATA9Q9BWV2 254 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 ZNF385DQ9H6B1 395 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 PSORS1C1Q9UIG5 152 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 EXOSC1Q9Y3B2 195 aaKnown RBP10.99□□□□□ -0.65
HDAC6-201ENST00000334136 HPGDSO60760 199 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 CSO75390 466 aaKnown RBP10.99□□□□□ -0.65
HDAC6-201ENST00000334136 ADAP00813 363 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 IFNA6P05013 189 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 F8A1P23610 371 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 EVI2BP34910 448 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 SOX2P48431 317 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 NUBP1P53384 320 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 TIAL1Q01085 375 aaKnown RBP eCLIP10.99□□□□□ -0.653e-9■□□□□ 10.5
HDAC6-201ENST00000334136 GBX1Q14549 363 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 LRRC37A5PQ49AS3 106 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 ABHD17CQ6PCB6 329 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 SLC23A3Q6PIS1 610 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 DHRS4L2Q6PKH6 230 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 ZNF767PQ75MW2 155 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 BMP8AQ7Z5Y6 402 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 THAP3Q8WTV1 239 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-201ENST00000334136 DUS3LQ96G46 650 aaKnown RBP10.99□□□□□ -0.65
HDAC6-201ENST00000334136 NEDD4LQ96PU5 975 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 PRMT8Q9NR22 394 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-201ENST00000334136 INIPQ9NRY2 104 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 CNIH4Q9P003 139 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 LOXL2Q9Y4K0 774 aa10.99□□□□□ -0.65
HDAC6-201ENST00000334136 TEX13CA0A0J9YWL9 993 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 OR14I1A6ND48 311 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 LDB3O75112 727 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 ZNF806P0C7X5 589 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 SPTBP11277 2137 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 UQCRC2P22695 453 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 TRA2BP62995 288 aaKnown RBP10.98□□□□□ -0.65
HDAC6-201ENST00000334136 STPG1Q5TH74 334 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 B3GLCTQ6Y288 498 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 CCDC36Q8IYA8 594 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 SLC25A45Q8N413 288 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 HMGCLL1Q8TB92 370 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 EPYCQ99645 322 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 NIPSNAP1Q9BPW8 284 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 BHLHE41Q9C0J9 482 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-201ENST00000334136 ADAM29Q9UKF5 820 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 HTTP42858 3142 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 PTPRSQ13332 1948 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 TCRBV5S2A0A599 114 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 FMO6PO60774 539 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 GUCA1AP43080 201 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-201ENST00000334136 YBX1P67809 324 aaKnown RBP10.98□□□□□ -0.65
HDAC6-201ENST00000334136 TRIM46Q7Z4K8 759 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 MOSPD2Q8NHP6 518 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 DYNC2LI1Q8TCX1 351 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 RANBP3Q9H6Z4 567 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-201ENST00000334136 NTN4Q9HB63 628 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 FOLH1BQ9HBA9 442 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 MYNNQ9NPC7 610 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 PCYT1BQ9Y5K3 369 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-201ENST00000334136 ANKRD36A6QL64 1941 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 LRIT2A6NDA9 550 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 EMC8O43402 210 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 ARL6IP5O75915 188 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 ECDO95905 644 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-201ENST00000334136 MT-CO3P00414 261 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 DDCP20711 480 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 CHMP24386 653 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 ACVR2AP27037 513 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 WNT4P56705 351 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 HBA1P69905 142 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 TRAM2Q15035 370 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 FLYWCH1Q4VC44 716 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 ZNF782Q6ZMW2 699 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-201ENST00000334136 NUP43Q8NFH3 380 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 SETD6Q8TBK2 473 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 ARL6Q9H0F7 186 aa10.98□□□□□ -0.65
HDAC6-201ENST00000334136 SLC6A20Q9NP91 592 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms