RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 GABRA3P34903 492 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 AGFG1P52594 562 aaKnown RBP12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 MGAT2Q10469 447 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 CDK10Q15131 360 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 QPRTQ15274 297 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 PLET1Q6UQ28 207 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 TRILQ7L0X0 811 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 LNX2Q8N448 690 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 ZNF614Q8N883 585 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 OR4N2Q8NGD1 307 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 CNOT9Q92600 299 aaKnown RBP12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 TCEAL2Q9H3H9 227 aaPredicted RBP12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 RBFOX1Q9NWB1 397 aaKnown RBP12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 SIGLEC7Q9Y286 467 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 DAPL1A0PJW8 107 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 FAM25AB3EWG3 89 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 FAM25CB3EWG5 89 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 FAM25GB3EWG6 89 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 CYR61O00622 381 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 LYRM1O43325 122 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 THBS1P07996 1170 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 NGFRP08138 427 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 BMP7P18075 431 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 SLC3A1Q07837 685 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 NFATC4Q14934 902 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 CCDC85BQ15834 202 aaPredicted RBP12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 PRICKLE4Q2TBC4 344 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 ZNF542PQ5EBM4 170 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 SSX6Q7RTT6 188 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 OR13C5Q8NGS8 318 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 OR5W2Q8NH69 310 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 SIPA1Q96FS4 1042 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 POLHQ9Y253 713 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 ALG5Q9Y673 324 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 TNFSF14O43557 240 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 AGR2O95994 175 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 ACVR1BP36896 505 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 OR12D2P58182 307 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 KIR2DS3Q14952 304 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 EXOSC6Q5RKV6 272 aaKnown RBP12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 SYT9Q86SS6 491 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 ARL14Q8N4G2 192 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 KCNJ15Q99712 375 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 GABRG3Q99928 467 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 RBCK1Q9BYM8 510 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 MAT2BQ9NZL9 334 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 FLRT3Q9NZU0 649 aa12.42□□□□□ -0.42
TUBA1B-201ENST00000332858 TICRRQ7Z2Z1 1910 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 A0A1W2PPK0 400 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 FAM172BPA6NC97 362 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 OR2W5A6NFC9 320 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 SMLR1H3BR10 107 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 DBIP07108 87 aaKnown RBP12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 CELA2BP08218 269 aaPredicted RBP12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 CRMP1Q14194 572 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 NOXA1Q86UR1 476 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 ASCC1Q8N9N2 400 aaKnown RBP12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 OR52L1Q8NGH7 329 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 SLC22A18Q96BI1 424 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 PEX11GQ96HA9 241 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 WDR92Q96MX6 357 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 TNFRSF13CQ96RJ3 184 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 GFM1Q96RP9 751 aaKnown RBP12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 GAS2L1Q99501 681 aaPredicted RBP12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 COQ7Q99807 217 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 CACYBPQ9HB71 228 aaKnown RBP12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 WBP1LQ9NX94 342 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 EXTL2Q9UBQ6 330 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 PCOLCE2Q9UKZ9 415 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 HEATR5AQ86XA9 2040 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 FAM240BA0A1B0GVZ2 78 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 SGK494L7N484 410 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 HRKO00198 91 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 GNB5O14775 395 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 HCN1O60741 890 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 RGS9O75916 674 aaPredicted RBP12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 PPP1R3DO95685 299 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 ATP1B1P05026 303 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 EIF4EP06730 217 aaKnown RBP12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 SDHBP21912 280 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 THBS2P35442 1172 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 TNFRSF4P43489 277 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 TOMM20Q15388 145 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 TMEM44Q2T9K0 475 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 EIPR1Q53HC9 387 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 ASB18Q6ZVZ8 466 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 YIPF7Q8N8F6 280 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 C7orf57Q8NEG2 295 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 OR51L1Q8NGJ5 315 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 ZFYVE21Q9BQ24 234 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 JAM3Q9BX67 310 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 CMC2Q9NRP2 79 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 PCDHGB7Q9Y5F8 929 aa12.41□□□□□ -0.42
TUBA1B-201ENST00000332858 J3QLW9 94 aa12.4□□□□□ -0.42
TUBA1B-201ENST00000332858 ZNF19P17023 458 aa12.4□□□□□ -0.42
TUBA1B-201ENST00000332858 EMDP50402 254 aa12.4□□□□□ -0.42
TUBA1B-201ENST00000332858 GALEQ14376 348 aa12.4□□□□□ -0.42
TUBA1B-201ENST00000332858 ALG11Q2TAA5 492 aa12.4□□□□□ -0.42
TUBA1B-201ENST00000332858 DEFB110Q30KQ9 67 aa12.4□□□□□ -0.42
TUBA1B-201ENST00000332858 GID4Q8IVV7 300 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms