RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 FANK1Q8TC84 345 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 BRIX1Q8TDN6 353 aaKnown RBP16.43■□□□□ 0.22
ACTB-201ENST00000331789 CTRCQ99895 268 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 UBQLN3Q9H347 655 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 GDF9O60383 454 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 SYPP08247 313 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 SP9P0CG40 484 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 HSMCR30P0CW71 290 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 HPGDP15428 266 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 TBXA2RP21731 343 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 CSTF2P33240 577 aaKnown RBP eCLIP16.43■□□□□ 0.22
ACTB-201ENST00000331789 ARMCX4Q5H9R4 360 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 LCN10Q6JVE6 187 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 ULK3Q6PHR2 472 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 OR2T33Q8NG76 320 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 PHOSPHO1Q8TCT1 267 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 ZNF426Q9BUY5 554 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 WWTR1Q9GZV5 400 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 COPS7AQ9UBW8 275 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 TMEM5Q9Y2B1 443 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 SLC35A3Q9Y2D2 325 aa16.43■□□□□ 0.22
ACTB-201ENST00000331789 EFCAB9A8MZ26 197 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 KDM4EB2RXH2 506 aaPredicted RBP16.42■□□□□ 0.22
ACTB-201ENST00000331789 SCDO00767 359 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 HEXBP07686 556 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 SAGP10523 405 aaPredicted RBP16.42■□□□□ 0.22
ACTB-201ENST00000331789 TGFBR1P36897 503 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 DCAF7P61962 342 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 DCDP81605 110 aaKnown RBP16.42■□□□□ 0.22
ACTB-201ENST00000331789 DYNC1I2Q13409 638 aaKnown RBP16.42■□□□□ 0.22
ACTB-201ENST00000331789 MED22Q15528 200 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 TCEAL6Q6IPX3 200 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 ZNF367Q7RTV3 350 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 BMP8AQ7Z5Y6 402 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 PPP1R3BQ86XI6 285 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 SLC34A3Q8N130 599 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 CYP4Z2PQ8N1L4 340 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 ZNF527Q8NB42 609 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 OR52I1Q8NGK6 324 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 NDNFQ8TB73 568 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 TCEAL3Q969E4 200 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 LGALS12Q96DT0 336 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 PLEKHA8Q96JA3 519 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 BCL7BQ9BQE9 202 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 PRRG3Q9BZD7 231 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 TIMMDC1Q9NPL8 285 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 MRTO4Q9UKD2 239 aaKnown RBP16.42■□□□□ 0.22
ACTB-201ENST00000331789 CARD8Q9Y2G2 431 aa16.42■□□□□ 0.22
ACTB-201ENST00000331789 TRAV27A0A087WT01 109 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 IDSB3KWA1 339 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 PRODHO43272 600 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 ICOSLGO75144 302 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 PTP4A3O75365 173 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 APOL3O95236 402 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 CDK4P11802 303 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 ADH7P40394 386 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 RBM34P42696 430 aaKnown RBP16.41■□□□□ 0.22
ACTB-201ENST00000331789 DUSP3P51452 185 aaPredicted RBP16.41■□□□□ 0.22
ACTB-201ENST00000331789 GPR143P51810 404 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 GAS1P54826 345 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 NCS1P62166 190 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 ZNF385CQ66K41 422 aaPredicted RBP16.41■□□□□ 0.22
ACTB-201ENST00000331789 PAQR6Q6TCH4 344 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 THSD4Q6ZMP0 1018 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 SLC29A4Q7RTT9 530 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 SLC46A3Q7Z3Q1 461 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 ANKRD37Q7Z713 158 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 ZBTB46Q86UZ6 589 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 FAM71CQ8NEG0 241 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 OR51A7Q8NH64 312 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 RNFT2Q96EX2 444 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 TEX12Q9BXU0 123 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 RTN4RQ9BZR6 473 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 SIGLEC7Q9Y286 467 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 GTPBP1O00178 669 aaKnown RBP16.41■□□□□ 0.22
ACTB-201ENST00000331789 NTN3O00634 580 aaPredicted RBP16.41■□□□□ 0.22
ACTB-201ENST00000331789 HMGN1P05114 100 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 UBL4AP11441 157 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 GADD45AP24522 165 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 GRK5P34947 590 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 CRYZQ08257 329 aaKnown RBP16.41■□□□□ 0.22
ACTB-201ENST00000331789 CBLN3Q6UW01 205 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 OVCH1Q7RTY7 1134 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 ZNF440Q8IYI8 595 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 ZBTB44Q8NCP5 570 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 BBS1Q8NFJ9 593 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 TBC1D15Q8TC07 691 aa16.41■□□□□ 0.22
ACTB-201ENST00000331789 LSM2Q9Y333 95 aaKnown RBP16.41■□□□□ 0.22
ACTB-201ENST00000331789 D6RAR5 112 aa16.4■□□□□ 0.22
ACTB-201ENST00000331789 BHLHE40O14503 412 aa16.4■□□□□ 0.22
ACTB-201ENST00000331789 TO15178 435 aa16.4■□□□□ 0.22
ACTB-201ENST00000331789 SLC22A1O15245 554 aa16.4■□□□□ 0.22
ACTB-201ENST00000331789 TSPAN2O60636 221 aa16.4■□□□□ 0.22
ACTB-201ENST00000331789 RCBTB2O95199 551 aa16.4■□□□□ 0.22
ACTB-201ENST00000331789 IL12BP29460 328 aa16.4■□□□□ 0.22
ACTB-201ENST00000331789 COPZ1P61923 177 aa16.4■□□□□ 0.22
ACTB-201ENST00000331789 SKP2Q13309 424 aa16.4■□□□□ 0.22
ACTB-201ENST00000331789 SLC35F1Q5T1Q4 408 aa16.4■□□□□ 0.22
ACTB-201ENST00000331789 AADACL4Q5VUY2 407 aa16.4■□□□□ 0.22
ACTB-201ENST00000331789 ZNF441Q8N8Z8 693 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms