RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 ADGRG7Q96K78 797 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 KCNA7Q96RP8 456 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 SAP130Q9H0E3 1048 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 HEATR1Q9H583 2144 aaKnown RBP12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 PTGES2Q9H7Z7 377 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 SSU72Q9NP77 194 aaKnown RBP12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 MED11Q9P086 117 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 SLC17A7Q9P2U7 560 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 STOML1Q9UBI4 398 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 BCAP29Q9UHQ4 241 aa12.96□□□□□ -0.33
CTHRC1-201ENST00000330295 ZNF814B7Z6K7 855 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 RSL1D1O76021 490 aaKnown RBP12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 STAMBPO95630 424 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 CPMP14384 443 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 TIA1P31483 386 aaKnown RBP eCLIP12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 HTR6P50406 440 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 EFR3AQ14156 821 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 EXOSC7Q15024 291 aaKnown RBP12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 SWI5Q1ZZU3 235 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 MST1LQ2TV78 715 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 GLYR1Q49A26 553 aaPredicted RBP12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 GALNT18Q6P9A2 607 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 P2RY8Q86VZ1 359 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 NUDCD3Q8IVD9 361 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 ANKS4BQ8N8V4 417 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 FBXO17Q96EF6 278 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 SLITRK2Q9H156 845 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 KCNK9Q9NPC2 374 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 MYNNQ9NPC7 610 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 HIF1ANQ9NWT6 349 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 SIRT5Q9NXA8 310 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 UTS2RQ9UKP6 389 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 GRIP1Q9Y3R0 1128 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 ACTL7BQ9Y614 415 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 ATP23Q9Y6H3 246 aa12.95□□□□□ -0.34
CTHRC1-201ENST00000330295 POM121CA8CG34 1229 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 SHISA8B8ZZ34 492 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 TM9SF1O15321 606 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 SCO2O43819 266 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 TSPAN2O60636 221 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 SEC22BO75396 215 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 CHN1P15882 459 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 DDX5P17844 614 aaKnown RBP12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 ZNF83P51522 516 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 CCNIQ14094 377 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 TMEM44Q2T9K0 475 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 ARL13AQ5H913 290 aaPredicted RBP12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 KLHL17Q6TDP4 642 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 Q6ZT83 130 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 KIRREL3Q8IZU9 778 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 ABHD3Q8WU67 409 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 TMEM186Q96B77 213 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 C1GALT1C1Q96EU7 318 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 APIPQ96GX9 242 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 ZIM3Q96PE6 472 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 SLC6A7Q99884 636 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 VRK1Q99986 396 aaPredicted RBP12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 KRTAP17-1Q9BYP8 105 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 MIEF1Q9NQG6 463 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 DDX28Q9NUL7 540 aaKnown RBP12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 KLHL13Q9P2N7 655 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 FIS1Q9Y3D6 152 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 TRAF6Q9Y4K3 522 aa12.94□□□□□ -0.34
CTHRC1-201ENST00000330295 OR5H1A6NKK0 313 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 ADAMDEC1O15204 470 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 BIRC5O15392 142 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 TYROBPO43914 113 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 BPGMP07738 259 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 FGF4P08620 206 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 IL3P08700 152 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 PABPC4LP0CB38 370 aaKnown RBP12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 VSIG8P0DPA2 414 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 GGT1P19440 569 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 IL12BP29460 328 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 MPIP34949 423 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 FEN1P39748 380 aaKnown RBP12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 FOXA1P55317 472 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 PHC1P78364 1004 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 ZNF763Q0D2J5 394 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 MGAT2Q10469 447 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 FAM111BQ6SJ93 734 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 LARP4Q71RC2 724 aaKnown RBP eCLIP12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 WDR75Q8IWA0 830 aaKnown RBP12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 TUSC5Q8IXB3 177 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 DDIASQ8IXT1 998 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 OR2V1Q8NHB1 315 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 CDC26Q8NHZ8 85 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 C16orf78Q8WTQ4 265 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 BBS4Q96RK4 519 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 CCT7Q99832 543 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 BRINP2Q9C0B6 783 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 C1orf109Q9NX04 203 aa12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 GPR55Q9Y2T6 319 aaPredicted RBP12.93□□□□□ -0.34
CTHRC1-201ENST00000330295 TNFSF11O14788 317 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 BCAS2O75934 225 aaPredicted RBP12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 PGM3O95394 542 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 ATP1B1P05026 303 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 EVI2BP34910 448 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 KRT20P35900 424 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 SERPINB4P48594 390 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms