RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 UBL4AP11441 157 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 SHC1P29353 583 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 SOAT1P35610 550 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 SLC1A6P48664 564 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 CLNS1AP54105 237 aaKnown RBP12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 NR1H2P55055 460 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 RAC3P60763 192 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 NKX6-1P78426 367 aaPredicted RBP12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 PDCD2Q16342 344 aaPredicted RBP12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 PGS1Q32NB8 556 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 OGFOD2Q6N063 350 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 PPP4R4Q6NUP7 873 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 BIVMQ86UB2 503 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 CLECL1Q8IZS7 167 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 VPS37AQ8NEZ2 397 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 IGFBPL1Q8WX77 278 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 ST8SIA1Q92185 356 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 ARL8AQ96BM9 186 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 POM121Q96HA1 1249 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 REXO5Q96IC2 774 aaKnown RBP12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 USB1Q9BQ65 265 aaKnown RBP12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 HDHD5Q9BXW7 423 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 SRXN1Q9BYN0 137 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 DPY30Q9C005 99 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 KLHL4Q9C0H6 718 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 TMEM185BQ9H7F4 350 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 MEAF6Q9HAF1 191 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 EXD2Q9NVH0 621 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 KLHL13Q9P2N7 655 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 CLEC4AQ9UMR7 237 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 PCDHGB4Q9UN71 923 aa12.11□□□□□ -0.47
GTF3C6-201ENST00000329970 KIAA0513O60268 411 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 UGT2B17O75795 530 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 PRKD3O94806 890 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 OPN1LWP04000 364 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 LBPP18428 481 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 UQCRC2P22695 453 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 SFTPDP35247 375 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 TXNL4AP83876 142 aaKnown RBP12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 SKP2Q13309 424 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 CASP8Q14790 479 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 TOMM34Q15785 309 aaPredicted RBP12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 EXOC3L2Q2M3D2 409 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 TMEM201Q5SNT2 666 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 PDZK1Q5T2W1 519 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 C3orf33Q6P1S2 294 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 TFAP2EQ6VUC0 442 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 FCRLAQ7L513 359 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 GABRG1Q8N1C3 465 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 FAM71CQ8NEG0 241 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 ABHD3Q8WU67 409 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 C18orf12Q96KH6 178 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 HS3ST6Q96QI5 342 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 TMEM204Q9BSN7 226 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 SAP130Q9H0E3 1048 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 BCO1Q9HAY6 547 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 KCNE5Q9UJ90 142 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 CADP27708 2225 aa12.1□□□□□ -0.47
GTF3C6-201ENST00000329970 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 WDR91A4D1P6 747 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 FCMRO60667 390 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 SMPD2O60906 423 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 GCM2O75603 506 aaPredicted RBP12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 PAX1P15863 534 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 RPS26P62854 115 aaKnown RBP12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 PHC1P78364 1004 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 LRRC74AQ0VAA2 488 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 QPRTQ15274 297 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 GPR68Q15743 365 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 TMEM176BQ3YBM2 270 aaPredicted RBP12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 SAXO2Q658L1 398 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 ZNF614Q8N883 585 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 STEAP2Q8NFT2 490 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 OR4A15Q8NGL6 344 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 SLC25A43Q8WUT9 341 aaPredicted RBP12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 TMEM234Q8WY98 164 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 ROBO4Q8WZ75 1007 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 ZNF524Q96C55 264 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 NEURL3Q96EH8 262 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 ZC3HAV1LQ96H79 300 aaKnown RBP12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 CCL19Q99731 98 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 GSX2Q9BZM3 304 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 ACTR6Q9GZN1 396 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 OR51I1Q9H343 314 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 KLHL9Q9P2J3 617 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 BTNL2Q9UIR0 455 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 SLC35A3Q9Y2D2 325 aa12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 V9GYY5 206 aaPredicted RBP12.09□□□□□ -0.47
GTF3C6-201ENST00000329970 E9PBE3 544 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 CSTAP01040 98 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 YES1P07947 543 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 HOXB4P17483 251 aaPredicted RBP12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 PGCP20142 388 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 BGNP21810 368 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 FKBP2P26885 142 aaKnown RBP12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 SLC7A1P30825 629 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 PGM1P36871 562 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 STX3Q13277 289 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 MPP2Q14168 576 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms