RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 EI24O14681 340 aa13.92□□□□□ -0.18
PRPF3-201ENST00000324862 CASQ2O14958 399 aaPredicted RBP13.92□□□□□ -0.18
PRPF3-201ENST00000324862 H1F0P07305 194 aaKnown RBP13.92□□□□□ -0.18
PRPF3-201ENST00000324862 ELAVL4P26378 380 aaKnown RBP13.92□□□□□ -0.18
PRPF3-201ENST00000324862 SOX8P57073 446 aa13.92□□□□□ -0.18
PRPF3-201ENST00000324862 OGFRL1Q5TC84 451 aaPredicted RBP13.92□□□□□ -0.18
PRPF3-201ENST00000324862 RTL4Q6ZR62 310 aa13.92□□□□□ -0.18
PRPF3-201ENST00000324862 TMEM255BQ8WV15 326 aa13.92□□□□□ -0.18
PRPF3-201ENST00000324862 POP5Q969H6 163 aaKnown RBP13.92□□□□□ -0.18
PRPF3-201ENST00000324862 UTP23Q9BRU9 249 aaKnown RBP13.92□□□□□ -0.18
PRPF3-201ENST00000324862 LAT2Q9GZY6 243 aa13.92□□□□□ -0.18
PRPF3-201ENST00000324862 DSN1Q9H410 356 aa13.92□□□□□ -0.18
PRPF3-201ENST00000324862 PDP1Q9P0J1 537 aaPredicted RBP13.92□□□□□ -0.18
PRPF3-201ENST00000324862 PPP4R1LQ9P1A2 415 aa13.92□□□□□ -0.18
PRPF3-201ENST00000324862 TESQ9UGI8 421 aaKnown RBP13.92□□□□□ -0.18
PRPF3-201ENST00000324862 CACNA1GO43497 2377 aa13.92□□□□□ -0.18
PRPF3-201ENST00000324862 PTPRQQ9UMZ3 2332 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 PIEZO2Q9H5I5 2752 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 G3V2T6 193 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 K7EM74 188 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 ADAMDEC1O15204 470 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 RRP8O43159 456 aaKnown RBP13.91□□□□□ -0.18
PRPF3-201ENST00000324862 LYPD3O95274 346 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 LIMS1P48059 325 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 ZNF550Q7Z398 422 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 B4GALNT2Q8NHY0 566 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 ALPK1Q96QP1 1244 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 PRSS27Q9BQR3 290 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 SLC25A12O75746 678 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 POU2F1P14859 743 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 CCNA2P20248 432 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 C17orf67Q0P5P2 114 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 COLEC12Q5KU26 742 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 PODNL1Q6PEZ8 512 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 UNQ6494/PRO21346Q6UXR6 183 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 CYP4Z1Q86W10 505 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 PIK3C3Q8NEB9 887 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 OR5M1Q8NGP8 315 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 ZNF563Q8TA94 476 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 SGCZQ96LD1 299 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 ANGPTL4Q9BY76 406 aa13.91□□□□□ -0.18
PRPF3-201ENST00000324862 A0A0B4J2E0 115 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 A0A1B0GX12 115 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 KPNA4O00629 521 aaPredicted RBP13.9□□□□□ -0.18
PRPF3-201ENST00000324862 PIP5K1CO60331 668 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 PDGFAP04085 211 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 ZNF26P17031 533 aaPredicted RBP13.9□□□□□ -0.18
PRPF3-201ENST00000324862 DNAJA1P31689 397 aaKnown RBP13.9□□□□□ -0.18
PRPF3-201ENST00000324862 CLK3P49761 638 aaKnown RBP13.9□□□□□ -0.18
PRPF3-201ENST00000324862 P2RX1P51575 399 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 ZBTB49Q6ZSB9 765 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 ZDHHC13Q8IUH4 622 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 OFCC1Q8IZS5 231 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 OR5W2Q8NH69 310 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 MAGEE2Q8TD90 523 aaPredicted RBP13.9□□□□□ -0.18
PRPF3-201ENST00000324862 GPR119Q8TDV5 335 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 DHRS1Q96LJ7 313 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 MED12Q93074 2177 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 A0A087WUU8 490 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 P04436 131 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 RFPL3SP0C7P2 107 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 ARG2P78540 354 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 MFAP5Q13361 173 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 QPRTQ15274 297 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 ALG10BQ5I7T1 473 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 SHQ1Q6PI26 577 aaKnown RBP13.9□□□□□ -0.18
PRPF3-201ENST00000324862 PACS2Q86VP3 889 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 LSMEM1Q8N8F7 131 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 C3orf49Q96BT1 292 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 ZNF559Q9BR84 538 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 FUZQ9BT04 418 aa13.9□□□□□ -0.18
PRPF3-201ENST00000324862 EXOSC3Q9NQT5 275 aaKnown RBP13.9□□□□□ -0.18
PRPF3-201ENST00000324862 NBEAQ8NFP9 2946 aa13.9□□□□□ -0.19
PRPF3-201ENST00000324862 TRAPPC13A5PLN9 417 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 OR5H15A6NDH6 313 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 K7ENP7 123 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 EIF4E2O60573 245 aaKnown RBP13.89□□□□□ -0.19
PRPF3-201ENST00000324862 MITFO75030 526 aaPredicted RBP13.89□□□□□ -0.19
PRPF3-201ENST00000324862 FPR1P21462 350 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 MASP1P48740 699 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 AQP4P55087 323 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 INO80CQ6PI98 192 aaPredicted RBP13.89□□□□□ -0.19
PRPF3-201ENST00000324862 APLFQ8IW19 511 aaPredicted RBP13.89□□□□□ -0.19
PRPF3-201ENST00000324862 OR5K1Q8NHB7 308 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 EXTL1Q92935 676 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 EPYCQ99645 322 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 GPA33Q99795 319 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 TMEM27Q9HBJ8 222 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 SACM1LQ9NTJ5 587 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 ABI3Q9P2A4 366 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 CPAMD8Q8IZJ3 1885 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 A0A1W2PRQ8 180 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 OR5F1O95221 314 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 HMGA2P52926 109 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 COPZ1P61923 177 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 ST3GAL3Q11203 375 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 DGCR6Q14129 220 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 GALNTL5Q7Z4T8 443 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 OR2M3Q8NG83 312 aa13.89□□□□□ -0.19
PRPF3-201ENST00000324862 PFN4Q8NHR9 129 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms