RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 TAGLN2P37802 199 aaKnown RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 BIDP55957 195 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 C15orf52Q6ZUT6 534 aaKnown RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 SLC35F5Q8WV83 523 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ELP4Q96EB1 424 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ACAD8Q9UKU7 415 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 PRKYO43930 277 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 DCTP40126 519 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 DLX5P56178 289 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 CARD18P57730 90 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 TAS2R31P59538 309 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ACTBP60709 375 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ACTG1P63261 375 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 IL13RA1P78552 427 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 CHRNEQ04844 493 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ELOCQ15369 112 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 TECRLQ5HYJ1 363 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ECHDC3Q96DC8 303 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 HHIPQ96QV1 700 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 MACROD1Q9BQ69 325 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 FZD8Q9H461 694 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 MTCL1Q9Y4B5 1905 aaKnown RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 HNF1AP20823 631 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 PTAFRP25105 342 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ADARB1P78563 741 aaKnown RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 C2CD4CQ8TF44 421 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 GAB3Q8WWW8 586 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 DAZAP1Q96EP5 407 aaKnown RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 MRGPRX2Q96LB1 330 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 MRIQ9BWK5 157 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 DPH1Q9BZG8 443 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 FN3KRPQ9HA64 309 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 PTBP3O95758 552 aaKnown RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 RPA2P15927 270 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 GABRA2P47869 451 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 SPATS1Q496A3 300 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 PDE7BQ9NP56 450 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 UFSP2Q9NUQ7 469 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 SGK494L7N484 410 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 NATD1Q8N6N6 113 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 OR51D1Q8NGF3 324 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 BRI3BPQ8WY22 251 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 APIPQ96GX9 242 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 MAGIXQ9H6Y5 334 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ABRACLQ9P1F3 81 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 SCAMP2O15127 329 aaKnown RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 RNH1P13489 461 aaKnown RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 SERPINA2P20848 420 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 THBS2P35442 1172 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 AKR1C3P42330 323 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 TAS2R38P59533 333 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 VHLLQ6RSH7 139 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 GLB1L2Q8IW92 636 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 DDIT4LQ96D03 193 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 LRFN5Q96NI6 719 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 DDX31Q9H8H2 851 aaKnown RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 TP53TG5Q9Y2B4 290 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 C2orf78A6NCI8 922 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 SERPINE2P07093 398 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 CSF1P09603 554 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 SNHG28P0DPA3 235 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ABOP16442 354 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 IL4RP24394 825 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 GPR143P51810 404 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ACTA2P62736 377 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ACTG2P63267 376 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ACTC1P68032 377 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ACTA1P68133 377 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 PITX1P78337 314 aaPredicted RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 MRPS34P82930 218 aaKnown RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 PAFAH1B3Q15102 231 aaKnown RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 C4orf17Q53FE4 359 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 CNKSR3Q6P9H4 555 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 FAM199XQ6PEV8 388 aaPredicted RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 GPRIN1Q7Z2K8 1008 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 SIAH3Q8IW03 269 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ZBTB8AQ96BR9 441 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 OARD1Q9Y530 152 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 KDM4FA0A1W2PPD8 638 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 FTCDNL1E5RQL4 147 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ARHGEF15O94989 841 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 OR2C1O95371 312 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ZNF454Q8N9F8 522 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 INTS12Q96CB8 462 aaKnown RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 ITPKCQ96DU7 683 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 LUZP4Q9P127 313 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 DNAJB11Q9UBS4 358 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 CUL9Q8IWT3 2517 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 TRAV27A0A087WT01 109 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 LOC285095A0A1B0GVY8 99 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 NPC1O15118 1278 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 FUCA1P04066 466 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ELLP55199 621 aaPredicted RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 RPL23AP62750 156 aaKnown RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 SMN1Q16637 294 aaKnown RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 PXDC1Q5TGL8 231 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 DCP2Q8IU60 420 aaKnown RBP7.44□□□□□ -1.22
CIITA-201ENST00000324288 PLPP5Q8NEB5 264 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ZNF597Q96LX8 424 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms