RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 SCN3BQ9NY72 215 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 DNAJC27Q9NZQ0 273 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 PPIEQ9UNP9 301 aaKnown RBP16.88■□□□□ 0.29
USP39-201ENST00000323701 SYNDIG1LA6NDD5 238 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 SCDO00767 359 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 IFI30P13284 250 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 HPGDP15428 266 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 IL12BP29460 328 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 ST13P50502 369 aaKnown RBP16.88■□□□□ 0.29
USP39-201ENST00000323701 MLLT10P55197 1068 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 EFNB1P98172 346 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 ZBED5Q49AG3 693 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 SLC30A6Q6NXT4 461 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 LINC00114Q6XXX2 140 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 HSDL2Q6YN16 418 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 SLC34A3Q8N130 599 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 OR4Q3Q8NH05 313 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 FGF11Q92914 225 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 SH3YL1Q96HL8 342 aaPredicted RBP16.88■□□□□ 0.29
USP39-201ENST00000323701 TRIM2Q9C040 744 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 TMEM9BQ9NQ34 198 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 PLCXD1Q9NUJ7 323 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 FKBP14Q9NWM8 211 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 AHCTF1Q8WYP5 2266 aa16.88■□□□□ 0.29
USP39-201ENST00000323701 TRBV11-1A0A0K0K1C0 115 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 B4E171 279 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 WWP2O00308 870 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 ADAM10O14672 748 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 KLK3P07288 261 aaPredicted RBP16.87■□□□□ 0.29
USP39-201ENST00000323701 UBL4AP11441 157 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 JUNBP17275 347 aaPredicted RBP16.87■□□□□ 0.29
USP39-201ENST00000323701 ADH7P40394 386 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 TSPAN7P41732 249 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 DBPQ10586 325 aaPredicted RBP16.87■□□□□ 0.29
USP39-201ENST00000323701 ZNF620Q6ZNG0 422 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 ZNF550Q7Z398 422 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 GPR141Q7Z602 305 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 C7orf57Q8NEG2 295 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 OR5M3Q8NGP4 307 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 FAR1Q8WVX9 515 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 HOXD1Q9GZZ0 328 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 WDR54Q9H977 334 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 IL20Q9NYY1 176 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 SLC35A3Q9Y2D2 325 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 FADS2O95864 444 aaKnown RBP16.87■□□□□ 0.29
USP39-201ENST00000323701 CH25HO95992 272 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 CELA2AP08217 269 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 CCR4P51679 360 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 SH3BGRP55822 239 aaPredicted RBP16.87■□□□□ 0.29
USP39-201ENST00000323701 PRKCDQ05655 676 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 ISXQ2M1V0 245 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 CASP12Q6UXS9 341 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 ZNF527Q8NB42 609 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 C17orf47Q8NEP4 570 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 BPIFA2Q96DR5 249 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 FAM210AQ96ND0 272 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 LRFN5Q96NI6 719 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 LPAR4Q99677 370 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 GPR52Q9Y2T5 361 aa16.87■□□□□ 0.29
USP39-201ENST00000323701 CLCA1A8K7I4 914 aa16.86■□□□□ 0.29
USP39-201ENST00000323701 TLX2O43763 284 aaPredicted RBP16.86■□□□□ 0.29
USP39-201ENST00000323701 STAT5AP42229 794 aa16.86■□□□□ 0.29
USP39-201ENST00000323701 GP2P55259 537 aaKnown RBP16.86■□□□□ 0.29
USP39-201ENST00000323701 SLC26A5P58743 744 aa16.86■□□□□ 0.29
USP39-201ENST00000323701 SNRPGP62308 76 aaKnown RBP16.86■□□□□ 0.29
USP39-201ENST00000323701 ZNF117Q03924 483 aa16.86■□□□□ 0.29
USP39-201ENST00000323701 TBC1D25Q3MII6 688 aa16.86■□□□□ 0.29
USP39-201ENST00000323701 OR13F1Q8NGS4 319 aa16.86■□□□□ 0.29
USP39-201ENST00000323701 OR13C2Q8NGS9 318 aa16.86■□□□□ 0.29
USP39-201ENST00000323701 ITFG2Q969R8 447 aa16.86■□□□□ 0.29
USP39-201ENST00000323701 SLC35B4Q969S0 331 aa16.86■□□□□ 0.29
USP39-201ENST00000323701 C3orf49Q96BT1 292 aa16.86■□□□□ 0.29
USP39-201ENST00000323701 HSPBAP1Q96EW2 488 aa16.86■□□□□ 0.29
USP39-201ENST00000323701 SAMD8Q96LT4 415 aa16.86■□□□□ 0.29
USP39-201ENST00000323701 COPS4Q9BT78 406 aa16.86■□□□□ 0.29
USP39-201ENST00000323701 TSSK6Q9BXA6 273 aa16.86■□□□□ 0.29
USP39-201ENST00000323701 PTRH2Q9Y3E5 179 aaKnown RBP16.86■□□□□ 0.29
USP39-201ENST00000323701 LRRN3E7EW58 273 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 MASP2O00187 686 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 ZNF264O43296 627 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 RGS10O43665 173 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 STSP08842 583 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 FBXW4P57775 412 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 FHL1Q13642 323 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 NCF4Q15080 339 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 TOMM34Q15785 309 aaPredicted RBP16.85■□□□□ 0.29
USP39-201ENST00000323701 ULK3Q6PHR2 472 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 RAB11FIP2Q7L804 512 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 TIPARPQ7Z3E1 657 aaKnown RBP16.85■□□□□ 0.29
USP39-201ENST00000323701 CLVS1Q8IUQ0 354 aaPredicted RBP16.85■□□□□ 0.29
USP39-201ENST00000323701 RNF113BQ8IZP6 322 aaKnown RBP16.85■□□□□ 0.29
USP39-201ENST00000323701 TMCO5AQ8N6Q1 288 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 TEX47Q8TBZ9 253 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 SLC25A19Q9HC21 320 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 TAS2R16Q9NYV7 291 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 PISDQ9UG56 409 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 PCDHGB1Q9Y5G3 927 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 SNX5Q9Y5X3 404 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 MPDZO75970 2070 aa16.85■□□□□ 0.29
USP39-201ENST00000323701 ZFHX2Q9C0A1 2572 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms