RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 KMT2BQ9UMN6 2715 aaPredicted RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 C5orf42Q9H799 3197 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 GOLGA4Q13439 2230 aaKnown RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 A0A1W2PRQ8 180 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 TCRBV5S2A0A599 114 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 AP3D1O14617 1153 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 IMPA2O14732 288 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 ARPC2O15144 300 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 AKAP8O43823 692 aaKnown RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 OR2T1O43869 369 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 UGT2B17O75795 530 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 VAMP5O95183 116 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 H6PDO95479 791 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 CNOT4O95628 575 aaKnown RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 PMS2P2O95744 297 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 IFNW1P05000 195 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 OR12D1P0DN82 309 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 CPN1P15169 458 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 GSTM3P21266 225 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 PTGDSP41222 190 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 CASP3P42574 277 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 KCNJ10P78508 379 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 ST3GAL3Q11203 375 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 DGCR6Q14129 220 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 OR1C1Q15619 314 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 GPAT3Q53EU6 434 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 ZNF766Q5HY98 468 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 ZNF311Q5JNZ3 666 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 DDX59Q5T1V6 619 aaKnown RBP eCLIP3□□□□□ -1.938e-6■■■■■ 27.9
SCAMP1-201ENST00000320280 PRAMEF17Q5VTA0 474 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 FAM199XQ6PEV8 388 aaPredicted RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 ULK3Q6PHR2 472 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 ZNF605Q86T29 641 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 METTL27Q8N6F8 245 aaPredicted RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 SLC16A11Q8NCK7 471 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 OR2M7Q8NG81 312 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 OR2M3Q8NG83 312 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 FBXO30Q8TB52 745 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 SLC26A7Q8TE54 656 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 KAT2AQ92830 837 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 FAM162AQ96A26 154 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 NPAS2Q99743 824 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 ZNF426Q9BUY5 554 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 SF3B5Q9BWJ5 86 aaKnown RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 UBQLN3Q9H347 655 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 METTL7AQ9H8H3 244 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 TMEM27Q9HBJ8 222 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 IL1RAPQ9NPH3 570 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 TIGARQ9NQ88 270 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 CCM2LQ9NUG4 571 aaPredicted RBP3□□□□□ -1.93
SCAMP1-201ENST00000320280 PPP4R1LQ9P1A2 415 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 LRFN1Q9P244 771 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 ARMCX1Q9P291 453 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 ICAM5Q9UMF0 924 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 B3GNT3Q9Y2A9 372 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 ENPP4Q9Y6X5 453 aa3□□□□□ -1.93
SCAMP1-201ENST00000320280 ARHGAP21Q5T5U3 1957 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 MED19A0JLT2 244 aaPredicted RBP2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 TRAPPC13A5PLN9 417 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 ARGFXA6NJG6 315 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 GLOD5A6NK44 160 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 NPIPB6E9PJ23 425 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 ADAM10O14672 748 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 EIF1BO60739 113 aaKnown RBP2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 WDR1O75083 606 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 DNAJB6O75190 326 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 JRKO75564 520 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 NEURL1O76050 574 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 IL18BPO95998 194 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 IGHMP01871 453 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 BCHEP06276 602 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 CHRM4P08173 479 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 TSPAN19P0C672 248 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 APEHP13798 732 aaKnown RBP2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 ZNF41P51814 821 aaPredicted RBP2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 RPS3AP61247 264 aaKnown RBP2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 COPZ1P61923 177 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 CSNK2A1P68400 391 aaPredicted RBP2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 ARG2P78540 354 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 ALDH6A1Q02252 535 aaKnown RBP2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 CHRNB3Q05901 458 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 ZP4Q12836 540 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 COX10Q12887 443 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 EXOSC7Q15024 291 aaKnown RBP2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 MAPK11Q15759 364 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 ST3GAL2Q16842 350 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 NKPD1Q17RQ9 610 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 CYBRD1Q53TN4 286 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 ZNF324BQ6AW86 544 aaPredicted RBP2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 GLYATQ6IB77 296 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 TMEM211Q6ICI0 200 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 C3orf33Q6P1S2 294 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 DGAT2L6Q6ZPD8 337 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 RINLQ6ZS11 566 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 DPPA2Q7Z7J5 298 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 BEST3Q8N1M1 668 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 OR1J4Q8NGS1 313 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 OR10A6Q8NH74 314 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 ZPLD1Q8TCW7 415 aa2.99□□□□□ -1.93
SCAMP1-201ENST00000320280 SLC9A6Q92581 669 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms