RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SLC30A6Q6NXT4 461 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 ZFP1Q6P2D0 407 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 CMIPQ8IY22 773 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 FAM71CQ8NEG0 241 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 CNTNAP3BQ96NU0 1288 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 CNTNAP3Q9BZ76 1288 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 ARMC1Q9NVT9 282 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 A4GNTQ9UNA3 340 aa14.02□□□□□ -0.17
PDLIM5-202ENST00000318007 MED12Q93074 2177 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 PEX1O43933 1283 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 MGRN1O60291 552 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 E2F6O75461 281 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 TRAPPC6AO75865 159 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 THY1P04216 161 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 MAGEA2P43356 314 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 MEOX1P50221 254 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 CBFBQ13951 182 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 QPRTQ15274 297 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 SLC25A25Q6KCM7 469 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 ZNF550Q7Z398 422 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 C10orf67Q8IYJ2 551 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 ZADH2Q8N4Q0 377 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 ATP6V1C2Q8NEY4 427 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 TOR1AIP2Q8NFQ8 470 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 OR2M7Q8NG81 312 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 OR5W2Q8NH69 310 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 ZNF597Q96LX8 424 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 FNDC11Q9BVV2 318 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 LAT2Q9GZY6 243 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 TMEM185BQ9H7F4 350 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 SDHAF3Q9NRP4 125 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 RPS6KB2Q9UBS0 482 aa14.01□□□□□ -0.17
PDLIM5-202ENST00000318007 NCKAP5O14513 1909 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 CLOCKO15516 846 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 HNRNPRO43390 633 aaKnown RBP14□□□□□ -0.17
PDLIM5-202ENST00000318007 ADH7P40394 386 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 PLGLB1Q02325 96 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 OR2T5Q6IEZ7 315 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 TMEM179BQ7Z7N9 219 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 PLCZ1Q86YW0 608 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 GRAMD2AQ8IUY3 354 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 GPALPP1Q8IXQ4 340 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 OR2T29Q8NH02 315 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 SLC41A3Q96GZ6 507 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 SECISBP2Q96T21 854 aaKnown RBP14□□□□□ -0.17
PDLIM5-202ENST00000318007 BARD1Q99728 777 aaKnown RBP14□□□□□ -0.17
PDLIM5-202ENST00000318007 PIP5K1AQ99755 562 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 NMNAT1Q9HAN9 279 aaPredicted RBP14□□□□□ -0.17
PDLIM5-202ENST00000318007 AGPAT4Q9NRZ5 378 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 TESQ9UGI8 421 aaKnown RBP14□□□□□ -0.17
PDLIM5-202ENST00000318007 SAMHD1Q9Y3Z3 626 aaKnown RBP14□□□□□ -0.17
PDLIM5-202ENST00000318007 A0A1B0GWA3 101 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 LRRC3CA6NJW4 275 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 PDLIM1O00151 329 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 NME2P1O60361 137 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 LDLRP01130 860 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 CELA3AP09093 270 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 ZNF23P17027 643 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 ITGA2P17301 1181 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 CNR1P21554 472 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 NME2P22392 152 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 GDF1P27539 372 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 ZNF41P51814 821 aaPredicted RBP14□□□□□ -0.17
PDLIM5-202ENST00000318007 SNTA1Q13424 505 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 ALG10BQ5I7T1 473 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 LPCAT4Q643R3 524 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 TBPL2Q6SJ96 375 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 YRDCQ86U90 279 aaKnown RBP14□□□□□ -0.17
PDLIM5-202ENST00000318007 CYP4Z1Q86W10 505 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 MISPQ8IVT2 679 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 NKAIN4Q8IVV8 208 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 PQLC1Q8N2U9 271 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 KDF1Q8NAX2 398 aaPredicted RBP14□□□□□ -0.17
PDLIM5-202ENST00000318007 PAPD5Q8NDF8 572 aaKnown RBP14□□□□□ -0.17
PDLIM5-202ENST00000318007 OR2M3Q8NG83 312 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 PHF10Q8WUB8 498 aaKnown RBP14□□□□□ -0.17
PDLIM5-202ENST00000318007 TMEM255BQ8WV15 326 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 RNF138Q8WVD3 245 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 PRRC1Q96M27 445 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 CIB1Q99828 191 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 DCLRE1BQ9H816 532 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 YY1AP1Q9H869 796 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 TMEM27Q9HBJ8 222 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 RIMS3Q9UJD0 308 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 DKKL1Q9UK85 242 aa14□□□□□ -0.17
PDLIM5-202ENST00000318007 PCDHGA9Q9Y5G4 932 aaKnown RBP14□□□□□ -0.17
PDLIM5-202ENST00000318007 TRBV4-1A0A0J9YWV2 114 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 SNPHO15079 494 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 EIF4E2O60573 245 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 SNX4O95219 450 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 GADD45GO95257 159 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 PEPDP12955 493 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 RHCEP18577 417 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 PRKACGP22612 351 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 MAGEA5P43359 124 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 FOXF1Q12946 379 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 LINC00303Q3SY05 128 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 OTUD3Q5T2D3 398 aaPredicted RBP13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 ANKRD34AQ69YU3 496 aa13.99□□□□□ -0.17
PDLIM5-202ENST00000318007 TIGD3Q6B0B8 471 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms