RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 UBE2FQ969M7 185 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 INTS14Q96SY0 518 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 NT5DC2Q9H857 520 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 PARPBPQ9NWS1 579 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 KNL1Q8NG31 2342 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 TARM1B6A8C7 271 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 ZNF16P17020 682 aaPredicted RBP12.89□□□□□ -0.35
SPAST-201ENST00000315285 LIPAP38571 399 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 NFATC4Q14934 902 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 FAM71E1Q6IPT2 247 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 ZNF322Q6U7Q0 402 aaPredicted RBP12.89□□□□□ -0.35
SPAST-201ENST00000315285 TMEM184AQ6ZMB5 413 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 OR13C2Q8NGS9 318 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 SNIP1Q8TAD8 396 aaKnown RBP12.89□□□□□ -0.35
SPAST-201ENST00000315285 NAA11Q9BSU3 229 aaPredicted RBP12.89□□□□□ -0.35
SPAST-201ENST00000315285 AMBRA1Q9C0C7 1298 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 A4GALTQ9NPC4 353 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 V9GY05 133 aa12.89□□□□□ -0.35
SPAST-201ENST00000315285 GOSR2O14653 212 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 ARPC5O15511 151 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 OR2T1O43869 369 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 RFPL3O75679 317 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 IGLV3-27P01718 113 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 KCNJ5P48544 419 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 POU3F4P49335 361 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 FIP1L1Q6UN15 594 aaKnown RBP12.88□□□□□ -0.35
SPAST-201ENST00000315285 TMEM150AQ86TG1 271 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 SYNPRQ8TBG9 265 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 ZNF582Q96NG8 517 aaPredicted RBP12.88□□□□□ -0.35
SPAST-201ENST00000315285 C7orf50Q9BRJ6 194 aaKnown RBP12.88□□□□□ -0.35
SPAST-201ENST00000315285 EVA1AQ9H8M9 152 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 ZNF337Q9Y3M9 751 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 SLC22A5O76082 557 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 HOXD12P35452 270 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 DUSP3P51452 185 aaPredicted RBP12.88□□□□□ -0.35
SPAST-201ENST00000315285 RPS25P62851 125 aaKnown RBP12.88□□□□□ -0.35
SPAST-201ENST00000315285 GLO1Q04760 184 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 TBC1D25Q3MII6 688 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 SLC6A19Q695T7 634 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 GSG1LQ6UXU4 331 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 ZNF852Q6ZMS4 543 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 TPRA1Q86W33 373 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 UEVLDQ8IX04 471 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 SLC7A13Q8TCU3 470 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 NECAB3Q96P71 396 aaPredicted RBP12.88□□□□□ -0.35
SPAST-201ENST00000315285 ZBP1Q9H171 429 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 GLIPR2Q9H4G4 154 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 CA14Q9ULX7 337 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 NHSQ6T4R5 1651 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 RAB3DO95716 219 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 JMJD7P0C870 316 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 GIFP27352 417 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 TNFRSF17Q02223 184 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 GAB1Q13480 694 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 KCNJ8Q15842 424 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 NKPD1Q17RQ9 610 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 ZNF704Q6ZNC4 412 aaPredicted RBP12.88□□□□□ -0.35
SPAST-201ENST00000315285 ADOQ96SZ5 270 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 PRSS16Q9NQE7 514 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 CBLCQ9ULV8 474 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 ECM29Q5VYK3 1845 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 ZNF850A8MQ14 1090 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 H0YGG7 62 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 CSF1P09603 554 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 UGT2B7P16662 529 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 ZNF43P17038 809 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 GNRHRP30968 328 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 ARF3P61204 181 aaPredicted RBP12.88□□□□□ -0.35
SPAST-201ENST00000315285 AGAP7PQ5VUJ5 663 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 RNF113BQ8IZP6 322 aaKnown RBP12.88□□□□□ -0.35
SPAST-201ENST00000315285 BRIX1Q8TDN6 353 aaKnown RBP12.88□□□□□ -0.35
SPAST-201ENST00000315285 CD300LFQ8TDQ1 290 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 AMDHD1Q96NU7 426 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 TXNL4BQ9NX01 149 aaKnown RBP12.88□□□□□ -0.35
SPAST-201ENST00000315285 ABRACLQ9P1F3 81 aa12.88□□□□□ -0.35
SPAST-201ENST00000315285 MYEF2Q9P2K5 600 aaKnown RBP12.88□□□□□ -0.35
SPAST-201ENST00000315285 DIMT1Q9UNQ2 313 aaKnown RBP12.88□□□□□ -0.35
SPAST-201ENST00000315285 OR2A25A4D2G3 310 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 FXYD1O00168 92 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 NCR1O76036 304 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 SYNGR4O95473 234 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 GNMTQ14749 295 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 HENMT1Q5T8I9 393 aaKnown RBP12.87□□□□□ -0.35
SPAST-201ENST00000315285 PRAMEF8Q5VWM4 474 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 PRAMEF7Q5VXH5 474 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 FOXB2Q5VYV0 432 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 ADAMTSL4Q6UY14 1074 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 COMMD7Q86VX2 200 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 OR9A4Q8NGU2 314 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 TMEM202A6NGA9 273 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 KLK8O60259 260 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 ZDHHC11BP0C7U3 371 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 TDGQ13569 410 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 EEF1A1P5Q5VTE0 462 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 C18orf63Q68DL7 685 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 IL20RBQ6UXL0 311 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 CHRDL2Q6WN34 429 aa12.87□□□□□ -0.35
SPAST-201ENST00000315285 FAM83FQ8NEG4 500 aaPredicted RBP12.87□□□□□ -0.35
SPAST-201ENST00000315285 ZNF587Q96SQ5 575 aaPredicted RBP12.87□□□□□ -0.35
SPAST-201ENST00000315285 SLC25A37Q9NYZ2 338 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms