RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CRYBA2P53672 197 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 HPCAP84074 193 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 TFF3Q07654 80 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 ZNF630Q2M218 657 aaPredicted RBP10.82□□□□□ -0.68
SCFD1-201ENST00000311943 METTL21CQ5VZV1 264 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 NSUN5P2Q63ZY6 315 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 NANOGP8Q6NSW7 305 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 AAGABQ6PD74 315 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 ENPP6Q6UWR7 440 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 SPATA21Q7Z572 469 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 GTPBP8Q8N3Z3 284 aaPredicted RBP10.82□□□□□ -0.68
SCFD1-201ENST00000311943 FAM71CQ8NEG0 241 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 OR5W2Q8NH69 310 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 OR10A6Q8NH74 314 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 PHF10Q8WUB8 498 aaKnown RBP10.82□□□□□ -0.68
SCFD1-201ENST00000311943 ZNF775Q96BV0 537 aaPredicted RBP10.82□□□□□ -0.68
SCFD1-201ENST00000311943 ADGRG7Q96K78 797 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 PIGQQ9BRB3 760 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 CCDC106Q9BWC9 280 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 OR11A1Q9GZK7 315 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 HOXD1Q9GZZ0 328 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 NANOGQ9H9S0 305 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 CLCF1Q9UBD9 225 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 MRPS18CQ9Y3D5 142 aaKnown RBP10.82□□□□□ -0.68
SCFD1-201ENST00000311943 CACNA1DQ01668 2161 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 PKDREJQ9NTG1 2253 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 HCFC1P51610 2035 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 ZC3H12DA2A288 527 aaKnown RBP10.82□□□□□ -0.68
SCFD1-201ENST00000311943 CCT8L1PA6NM43 557 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 SNX3O60493 162 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 IDH2P48735 452 aaKnown RBP10.82□□□□□ -0.68
SCFD1-201ENST00000311943 GZMMP51124 257 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 DLX5P56178 289 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 PER3P56645 1201 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 EEF1A1P68104 462 aaKnown RBP10.82□□□□□ -0.68
SCFD1-201ENST00000311943 SIRPAP78324 504 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 BNIP2Q12982 314 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 TMEM176BQ3YBM2 270 aaPredicted RBP10.82□□□□□ -0.68
SCFD1-201ENST00000311943 VWA1Q6PCB0 445 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 SERPINA11Q86U17 422 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 SMYD1Q8NB12 490 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 OR10D3Q8NH80 312 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 STON2Q8WXE9 905 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 ARL5BQ96KC2 179 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 SIKE1Q9BRV8 207 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 LAT2Q9GZY6 243 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 CTPS2Q9NRF8 586 aa10.82□□□□□ -0.68
SCFD1-201ENST00000311943 GMNCA6NCL1 334 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 MRASO14807 208 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 TACC2O95359 2948 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 AK1P00568 194 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 BMP2P12643 396 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 GP1BBP13224 206 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 GABRA1P14867 456 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 ENPP1P22413 925 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 EDNRAP25101 427 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 CEACAM8P31997 349 aaPredicted RBP10.81□□□□□ -0.68
SCFD1-201ENST00000311943 ACAA2P42765 397 aaKnown RBP10.81□□□□□ -0.68
SCFD1-201ENST00000311943 CDK6Q00534 326 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 DMTNQ08495 405 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 LRRC74AQ0VAA2 488 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 EIF3MQ7L2H7 374 aaKnown RBP10.81□□□□□ -0.68
SCFD1-201ENST00000311943 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.81□□□□□ -0.68
SCFD1-201ENST00000311943 LUZP2Q86TE4 346 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 DPP10Q8N608 796 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 LILRB4Q8NHJ6 448 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 WDR60Q8WVS4 1066 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 LRRC58Q96CX6 371 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 COQ10BQ9H8M1 238 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 MTHFD2LQ9H903 347 aaPredicted RBP10.81□□□□□ -0.68
SCFD1-201ENST00000311943 A4GALTQ9NPC4 353 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 UNC79Q9P2D8 2635 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 LIPT1Q9Y234 373 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 ZNF443Q9Y2A4 671 aaPredicted RBP10.81□□□□□ -0.68
SCFD1-201ENST00000311943 ITPR2Q14571 2701 aa10.81□□□□□ -0.68
SCFD1-201ENST00000311943 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 CDHR4A6H8M9 788 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 MBD3L4A6NDZ8 208 aaPredicted RBP10.8□□□□□ -0.68
SCFD1-201ENST00000311943 MBD3L3A6NE82 208 aaPredicted RBP10.8□□□□□ -0.68
SCFD1-201ENST00000311943 MBD3L5A6NJ08 208 aaPredicted RBP10.8□□□□□ -0.68
SCFD1-201ENST00000311943 H3BNH8 94 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 AIM2O14862 343 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 TPST2O60704 377 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 RAMP1O60894 148 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 AGR2O95994 175 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 ARAFP10398 606 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 NID1P14543 1247 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 TNFRSF1BP20333 461 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 LCN1P31025 176 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 SMSP52788 366 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 CRISP3P54108 245 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 MERTKQ12866 999 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 GANABQ14697 944 aaKnown RBP10.8□□□□□ -0.68
SCFD1-201ENST00000311943 GCNT6Q5T4J0 391 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 AP1ARQ63HQ0 302 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 XKRXQ6PP77 449 aa10.8□□□□□ -0.68
SCFD1-201ENST00000311943 MTERF4Q7Z6M4 381 aaKnown RBP10.8□□□□□ -0.68
SCFD1-201ENST00000311943 TSPYL5Q86VY4 417 aaPredicted RBP10.8□□□□□ -0.68
SCFD1-201ENST00000311943 RBM45Q8IUH3 476 aaKnown RBP10.8□□□□□ -0.68
SCFD1-201ENST00000311943 GRAMD2AQ8IUY3 354 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms