RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PCYT1AP49585 367 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 GPR143P51810 404 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 NUDT6P53370 316 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 GP2P55259 537 aaKnown RBP10.92□□□□□ -0.66
TRIM40-205ENST00000307859 CTBP2P56545 445 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 PRKCDQ05655 676 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 OCLNQ16625 522 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 GPR107Q5VW38 600 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 ACSM5Q6NUN0 579 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 SLC27A4Q6P1M0 643 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 ZNF620Q6ZNG0 422 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 ZNF440Q8IYI8 595 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 FAM26EQ8N5C1 309 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 IQCF1Q8N6M8 205 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 ZNF527Q8NB42 609 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 C17orf47Q8NEP4 570 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 EFHD2Q96C19 240 aaPredicted RBP10.92□□□□□ -0.66
TRIM40-205ENST00000307859 RNF31Q96EP0 1072 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 MPP4Q96JB8 637 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 HS6ST2Q96MM7 605 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 Q96MT0 163 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 WWTR1Q9GZV5 400 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 TMEM5Q9Y2B1 443 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 CPAMD8Q8IZJ3 1885 aa10.92□□□□□ -0.66
TRIM40-205ENST00000307859 EFCAB10A6NFE3 127 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 TRIM64BA6NI03 449 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 IDSB3KWA1 339 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 FLRT2O43155 660 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 PRKNO60260 465 aaPredicted RBP10.91□□□□□ -0.66
TRIM40-205ENST00000307859 UTS2O95399 124 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 FADS2O95864 444 aaKnown RBP10.91□□□□□ -0.66
TRIM40-205ENST00000307859 TBXA2RP21731 343 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 RBM34P42696 430 aaKnown RBP10.91□□□□□ -0.66
TRIM40-205ENST00000307859 MAP2K4P45985 399 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 TMBIM6P55061 237 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 SH3BGRP55822 239 aaPredicted RBP10.91□□□□□ -0.66
TRIM40-205ENST00000307859 PSPHP78330 225 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 TBCEQ15813 527 aaPredicted RBP10.91□□□□□ -0.66
TRIM40-205ENST00000307859 COL28A1Q2UY09 1125 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 SYT6Q5T7P8 510 aaPredicted RBP10.91□□□□□ -0.66
TRIM40-205ENST00000307859 C19orf48Q6RUI8 117 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 LINC00114Q6XXX2 140 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 SLC29A4Q7RTT9 530 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 ANKRD37Q7Z713 158 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 TCEANCQ8N8B7 351 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 AGBL5Q8NDL9 886 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 B3GNT7Q8NFL0 401 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 FCGR1BQ92637 280 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 RORBQ92753 470 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 OSTF1Q92882 214 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 C12orf43Q96C57 262 aaKnown RBP10.91□□□□□ -0.66
TRIM40-205ENST00000307859 GAL3ST4Q96RP7 486 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 IL4I1Q96RQ9 567 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 SEMA4CQ9C0C4 833 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 AMBNQ9NP70 447 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 EXOSC3Q9NQT5 275 aaKnown RBP10.91□□□□□ -0.66
TRIM40-205ENST00000307859 GPR83Q9NYM4 423 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 TVP23BQ9NYZ1 205 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 PPIEQ9UNP9 301 aaKnown RBP10.91□□□□□ -0.66
TRIM40-205ENST00000307859 CDH10Q9Y6N8 788 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 LNP1A1A4G5 178 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 SAGE2PA6NJ88 616 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 H3BMQ9 156 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 AGRPO00253 132 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 CDC42EP2O14613 210 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 PRKYO43930 277 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 TSPAN2O60636 221 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 CPNE3O75131 537 aaKnown RBP10.91□□□□□ -0.66
TRIM40-205ENST00000307859 CNOT3O75175 753 aaKnown RBP10.91□□□□□ -0.66
TRIM40-205ENST00000307859 ALOX12BO75342 701 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 ENTPD6O75354 484 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 HEXBP07686 556 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 NGFRP08138 427 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 FOXL2P58012 376 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 MC2RQ01718 297 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 C19orf57Q0VDD7 668 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 IRF3Q14653 427 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 NDUFAF6Q330K2 333 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 UBE2UQ5VVX9 321 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 MEDAGQ5VYS4 303 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 HLA-DQA1Q5Y7H0 255 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 ULK3Q6PHR2 472 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 KIRREL2Q6UWL6 708 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 SHISA6Q6ZSJ9 500 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 TMPRSS11FQ6ZWK6 438 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 SLCO6A1Q86UG4 719 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 SLC34A3Q8N130 599 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 NFAM1Q8NET5 270 aaPredicted RBP10.91□□□□□ -0.66
TRIM40-205ENST00000307859 PFN4Q8NHR9 129 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 GRHL3Q8TE85 626 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 ARSGQ96EG1 525 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 HSPBAP1Q96EW2 488 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 COG8Q96MW5 612 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 BBC3Q96PG8 261 aaPredicted RBP10.91□□□□□ -0.66
TRIM40-205ENST00000307859 SPSB2Q99619 263 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 TMEM9BQ9NQ34 198 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 FBXO8Q9NRD0 319 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 C20orf141Q9NUB4 165 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 TBC1D23Q9NUY8 699 aa10.91□□□□□ -0.66
TRIM40-205ENST00000307859 MED31Q9Y3C7 131 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms